Subset: Analysis

A subset of slots/attributes that are required for analysis.

URI: [Analysis](Analysis.md) ## Identifier and Mapping Information ### Schema Source * from schema: https://identifiers.org/brain-bican/library-generation-schema ## Slots in subset | Slot | Description | | --- | --- | | [amplified_cDNA_quantity_ng](amplified_cDNA_quantity_ng.md) | Amount of cDNA produced after cDNA amplification measured in nanograms | | [amplified_cDNA_result](amplified_cDNA_result.md) | Pass or Fail result based on qualitative assessment of cDNA yield and size | | [average_size_bp](average_size_bp.md) | Average size of the library in terms of base pairs | | [cDNA_amplification_set](cDNA_amplification_set.md) | cDNA amplification set, containing multiple amplified_cDNA_names that were pr... | | [cell_prep_type](cell_prep_type.md) | The type of cell preparation | | [enrichment_population](enrichment_population.md) | Actual percentage of cells as a result of using set of fluorescent marker lab... | | [input_quantity](input_quantity.md) | Number of enriched or dissociated cells/nuclei going into the barcoding proce... | | [input_quantity_ng](input_quantity_ng.md) | Amount of cDNA going into library construction in nanograms | | [library_construction_method](library_construction_method.md) | Standardized nomenclature to describe the specific library method used | | [library_construction_set](library_construction_set.md) | Library set, containing multiple library_names that were processed at the sam... | | [library_result](library_result.md) | Pass or Fail result based on qualitative assessment of library yield and size | | [number_of_expected_cells](number_of_expected_cells.md) | Expected number of cells/nuclei of a barcoded_cell_sample that will be barcod... | | [pcr_cycles](pcr_cycles.md) | Number of PCR cycles used during cDNA amplification for this cDNA | | [percent_cdna_longer_than_400bp](percent_cdna_longer_than_400bp.md) | QC metric to measure mRNA degradation of cDNA | | [port_well](port_well.md) | Specific position of the loaded port of the 10x chip | | [quantity_fmol](quantity_fmol.md) | Amount of library generated in terms of femtomoles | | [r1_r2_index](r1_r2_index.md) | Name of the pair of library indexes used for sequencing | | [tube_internal_label](tube_internal_label.md) | Library Pool Tube local name |