Slot: r1_r2_index
Name of the pair of library indexes used for sequencing. Indexes allow libraries to be pooled together for sequencing. Sequencing output (fastq) are demultiplexed by using the indexes for each library. The name will be associated with the sequences of i7, i5, and i5as, which are needed by SeqCores for demultiplexing. The required direction of the sequence (sense or antisense) of the index can differ depending on sequencing instruments.
URI: bican:c94b5d8a-e92d-47af-8c0e-ea3b58be4d06
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Library | A collection of fragmented and barcode-indexed DNA molecules for sequencing | no |
Properties
- Range: LibraryR1R2Index
Identifier and Mapping Information
Schema Source
- from schema: https://identifiers.org/brain-bican/library-generation-schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | bican:c94b5d8a-e92d-47af-8c0e-ea3b58be4d06 |
| native | bican:r1_r2_index |
| exact | NIMP:PD-VLLMWZ60 |
LinkML Source
name: r1_r2_index
local_names:
NIMP:
local_name_source: NIMP
local_name_value: library_r1_r2_index
description: Name of the pair of library indexes used for sequencing. Indexes allow
libraries to be pooled together for sequencing. Sequencing output (fastq) are demultiplexed
by using the indexes for each library. The name will be associated with the sequences
of i7, i5, and i5as, which are needed by SeqCores for demultiplexing. The required
direction of the sequence (sense or antisense) of the index can differ depending
on sequencing instruments.
in_subset:
- analysis
- tracking
from_schema: https://identifiers.org/brain-bican/library-generation-schema
exact_mappings:
- NIMP:PD-VLLMWZ60
rank: 1000
slot_uri: bican:c94b5d8a-e92d-47af-8c0e-ea3b58be4d06
alias: R1/R2 index name
owner: Library
domain_of:
- Library
range: library_r1_r2_index