Library Generation

erDiagram ProvEntity { } ProvActivity { } DissectionRoiPolygon { label_type name string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated } LibraryPooling { string process_date string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } LibraryConstruction { library_technique method date process_date float input_quantity_ng string set string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } CdnaAmplification { integer pcr_cycles date process_date string set string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } CellBarcoding { string port_well integer input_quantity string process_date barcoded_cell_sample_technique method string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } EnrichedCellSampleSplitting { string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } CellEnrichment { string process_date string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } CellDissociation { string process_date string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } TissueDissection { string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } DissectionRoiDelineation { string id iri_type iri uriorcurieList category stringList type label_type name narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } LibraryPool { label_type name string local_tube_id string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } LibraryAliquot { label_type name string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } Library { label_type name integer average_size_bp float concentration_nm library_prep_pass_fail pass_fail_result float quantity_fmol float quantity_ng library_r1_r2_index r1_r2_index string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } AmplifiedCdna { label_type name float quantity_ng amplified_cdna_rna_amplification_pass_fail pass_fail_result float percent_cdna_longer_than_400bp string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } BarcodedCellSample { label_type name integer number_of_expected_cells string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } EnrichedCellSample { label_type name string enrichment_population string cell_source_oligo_name string histone_modification_marker string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } DissociatedCellSample { label_type name dissociated_cell_sample_cell_prep_type cell_prep_type dissociated_cell_sample_cell_label_barcode cell_source_oligo_name string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } TissueSample { label_type name stringList structure string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } BrainSlab { label_type name string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } Donor { label_type name sex biological_sex string age_at_death_description age_at_death_reference_point age_at_death_reference_point age_at_death_unit age_at_death_unit float age_at_death_value string species label_type in_taxon_label string id iri_type iri uriorcurieList category stringList type narrative_text description boolean deprecated stringList provided_by uriorcurieList xref label_type full_name label_typeList synonym } ProvEntity ||--|o ProvEntity : "was_derived_from" ProvEntity ||--|o ProvActivity : "was_generated_by" ProvActivity ||--|o ProvEntity : "used" DissectionRoiPolygon ||--|o DissectionRoiDelineation : "was_generated_by" DissectionRoiPolygon ||--|o BrainSlab : "annotates" DissectionRoiPolygon ||--|o ProvEntity : "was_derived_from" DissectionRoiPolygon ||--}o Attribute : "has attribute" LibraryPooling ||--}o LibraryAliquot : "used" LibraryPooling ||--}o Attribute : "has attribute" LibraryConstruction ||--|o ProvEntity : "used" LibraryConstruction ||--}o Attribute : "has attribute" CdnaAmplification ||--|o BarcodedCellSample : "used" CdnaAmplification ||--}o Attribute : "has attribute" CellBarcoding ||--}o ProvEntity : "used" CellBarcoding ||--}o Attribute : "has attribute" EnrichedCellSampleSplitting ||--|o EnrichedCellSample : "used" EnrichedCellSampleSplitting ||--}o Attribute : "has attribute" CellEnrichment ||--}o DissociatedCellSample : "used" CellEnrichment ||--}o Attribute : "has attribute" CellDissociation ||--}o TissueSample : "used" CellDissociation ||--}o Attribute : "has attribute" TissueDissection ||--|o BrainSlab : "used" TissueDissection ||--|o DissectionRoiPolygon : "was_guided_by" TissueDissection ||--}o Attribute : "has attribute" DissectionRoiDelineation ||--|o BrainSlab : "used" DissectionRoiDelineation ||--}o Attribute : "has attribute" LibraryPool ||--|o LibraryPooling : "was_generated_by" LibraryPool ||--}o LibraryAliquot : "was_derived_from" LibraryPool ||--}o Attribute : "has attribute" LibraryAliquot ||--|o Library : "was_derived_from" LibraryAliquot ||--|o ProvActivity : "was_generated_by" LibraryAliquot ||--}o Attribute : "has attribute" Library ||--|o LibraryConstruction : "was_generated_by" Library ||--|o ProvEntity : "was_derived_from" Library ||--}o Attribute : "has attribute" AmplifiedCdna ||--|o CdnaAmplification : "was_generated_by" AmplifiedCdna ||--|o BarcodedCellSample : "was_derived_from" AmplifiedCdna ||--}o Attribute : "has attribute" BarcodedCellSample ||--|o CellBarcoding : "was_generated_by" BarcodedCellSample ||--}o ProvEntity : "was_derived_from" BarcodedCellSample ||--}o Attribute : "has attribute" EnrichedCellSample ||--|o ProvActivity : "was_generated_by" EnrichedCellSample ||--}o ProvEntity : "was_derived_from" EnrichedCellSample ||--}o Attribute : "has attribute" DissociatedCellSample ||--|o CellDissociation : "was_generated_by" DissociatedCellSample ||--}o TissueSample : "was_derived_from" DissociatedCellSample ||--}o Attribute : "has attribute" TissueSample ||--|o Donor : "was_derived_from" TissueSample ||--|o TissueDissection : "was_generated_by" TissueSample ||--|o DissectionRoiPolygon : "dissection_was_guided_by" TissueSample ||--}o Attribute : "has attribute" BrainSlab ||--|o Donor : "was_derived_from" BrainSlab ||--|o ProvActivity : "was_generated_by" BrainSlab ||--}o Attribute : "has attribute" Donor ||--}o OrganismTaxon : "in taxon" Donor ||--|o ProvEntity : "was_derived_from" Donor ||--|o ProvActivity : "was_generated_by" Donor ||--}o Attribute : "has attribute"