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Slot: library_construction_method

Standardized nomenclature to describe the specific library method used. This specifies the alignment method required for the library. For example, 10xV3.1 (for RNASeq single assay), 10xMult-GEX (for RNASeq multiome assay), and 10xMult-ATAC (for ATACSeq multiome assay).

URI: bican:library_construction_method

Applicable Classes

Name Description Modifies Slot
LibraryConstruction The process of constructing a library from input material (such as amplified ... no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://identifiers.org/brain-bican/library-generation-schema

Mappings

Mapping Type Mapped Value
self bican:library_construction_method
native bican:library_construction_method
exact NIMP:PD-AJAJCN35

LinkML Source

name: library_construction_method
local_names:
  NIMP:
    local_name_source: NIMP
    local_name_value: library_technique
description: Standardized nomenclature to describe the specific library method used.  This
  specifies the alignment method required for the library.  For example, 10xV3.1 (for
  RNASeq single assay), 10xMult-GEX (for RNASeq multiome assay), and 10xMult-ATAC
  (for ATACSeq multiome assay).
in_subset:
- analysis
- tracking
- alignment
from_schema: https://identifiers.org/brain-bican/library-generation-schema
exact_mappings:
- NIMP:PD-AJAJCN35
rank: 1000
alias: library_construction_method
owner: LibraryConstruction
domain_of:
- LibraryConstruction
range: library_technique