Slot: in_taxon
connects an entity to its taxonomic classification. Only certain kinds of entities can be taxonomically classified; see 'thing with taxon'
URI: biolink:in_taxon
Inheritance
- related_to
- related_to_at_instance_level
- in_taxon
- related_to_at_instance_level
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Genome | A genome is the sum of genetic material within a cell or virion | no |
| ThingWithTaxon | A mixin that can be used on any entity that can be taxonomically classified | no |
| GenomeAnnotation | Location and nomenclature of genes and all of the coding regions in a genome ... | no |
| BiologicalEntity | no | |
| GeneAnnotation | An annotation describing the location, boundaries, and functions of individu... | no |
| Gene | A region (or regions) that includes all of the sequence elements necessary to... | no |
| GenomeAssembly | Genome assembly to contain version and label information | no |
Properties
-
Range: OrganismTaxon
-
Multivalued: True
Aliases
- instance of
- is organism source of gene product
- organism has gene
- gene found in organism
- gene product has organism source
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| canonical_predicate | True |
Schema Source
- from schema: https://identifiers.org/brain-bican/genome-annotation-schema
LinkML Source
name: in taxon
definition_uri: https://w3id.org/biolink/vocab/in_taxon
annotations:
canonical_predicate:
tag: canonical_predicate
value: true
description: connects an entity to its taxonomic classification. Only certain kinds
of entities can be taxonomically classified; see 'thing with taxon'
in_subset:
- translator_minimal
from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
aliases:
- instance of
- is organism source of gene product
- organism has gene
- gene found in organism
- gene product has organism source
exact_mappings:
- RO:0002162
- WIKIDATA_PROPERTY:P703
narrow_mappings:
- RO:0002160
rank: 1000
is_a: related to at instance level
domain: thing with taxon
slot_uri: biolink:in_taxon
multivalued: true
inherited: true
alias: in_taxon
owner: thing with taxon
domain_of:
- thing with taxon
- biological entity
- gene
- genome
range: organism taxon