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Slot: id

A unique identifier for an entity. Must be either a CURIE shorthand for a URI or a complete URI

URI: biolink:id

Applicable Classes

Name Description Modifies Slot
Activity An activity is something that occurs over a period of time and acts upon or w... no
Attribute A property or characteristic of an entity no
ObservationMatrixCreationProcess The process of aggregating data to create an observation matrix (potentially ... no
ParcellationTerm A parcellation term is an individual term within a specific parcellation term... no
AnatomicalAnnotationSet An anatomical annotation set is a versioned release of a set of anatomical an... no
GenomeAssembly Represents a genome assembly no
ParcellationTermSet A parcellation term set is the set of parcellation terms within a specific pa... no
ObservationMatrix A matrix (potentially virtual) of observations no
NamedThing a databased entity or concept/class no
CellTypeTaxon A cell type taxon is a node in a taxonomy yes
InformationContentEntity a piece of information that typically describes some topic of discourse or is... no
DisplayColor One element of a color palette representing the association between a color a... yes
ObservationRow One specific row of the observation matrix representing a set of measurements... no
ParcellationColorScheme A parcellation color scheme is a versioned release color palette that can be ... no
OrganismTaxon A classification of a set of organisms no
Dataset an item that refers to a collection of data from a data source no
Entity Root Biolink Model class for all things and informational relationships, real... no
ParcellationAtlas A parcellation atlas is a versioned release reference used to guide experimen... no
Cluster One specific cluster from the set of clusters determined by a clustering proc... yes
ClusterSet The output of a clustering process where input observations are organized or ... yes
ImageDataset An image dataset is versioned release of a multidimensional regular grid of m... no
Genome A genome is the sum of genetic material within a cell or virion no
ParcellationTerminology A parcellation terminology is a versioned release set of terms that can be us... no
CellTypeTaxonomy A cell type taxonomy is a systematic classification of cell types and their h... yes
MaterialSample A sample is a limited quantity of something (e no
OntologyClass a concept or class in an ontology, vocabulary or thesaurus no
GenomeAnnotation Represents a genome annotation no
CellTypeSet A grouping of cell type taxons yes
Gene A region (or regions) that includes all of the sequence elements necessary to... no
ClusteringProcess The process of organizing and classifying observations into groups or cluster... no
VersionedNamedThing An iteration of the biolink:NamedThing class that stores metadata about the o... no
PhysicalEntity An entity that has material reality (a no
CellSpecimen ( defined as in BERS) no
MatrixFile A digital file containing the representation of full or partial data matrix no
AnatomicalSpace An anatomical space is versioned release of a mathematical space with a defin... no
ColorPalette A schematic set of display colors that can be applied to individual component... yes
CellTypeTaxonomyCreationProcess The process of organizing cells or clusters into a systematic classification ... no
Checksum Checksum values associated with digital entities no
Procedure A series of actions conducted in a certain order or manner no
GeneAnnotation Represents a single gene no
Abbreviation Maps an abbreviation string to its decoded meaning yes
TaxonomicRank A descriptor for the rank within a taxonomic classification no
BiologicalEntity no

Properties

  • Range: String

  • Required: True

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/brain-bican/bke-taxonomy

Mappings

Mapping Type Mapped Value
self biolink:id
native bican:id
exact AGRKB:primaryId, gff3:ID, gpi:DB_Object_ID

LinkML Source

name: id
definition_uri: https://w3id.org/biolink/vocab/id
description: A unique identifier for an entity. Must be either a CURIE shorthand for
  a URI or a complete URI
in_subset:
- translator_minimal
from_schema: https://w3id.org/brain-bican/bke-taxonomy
exact_mappings:
- AGRKB:primaryId
- gff3:ID
- gpi:DB_Object_ID
rank: 1000
domain: entity
slot_uri: biolink:id
identifier: true
alias: id
owner: entity
domain_of:
- ontology class
- entity
- CellTypeTaxonomy
- CellTypeSet
- CellTypeTaxon
- ClusterSet
- Cluster
- Abbreviation
- ColorPalette
- DisplayColor
- attribute
- named thing
- taxonomic rank
- organism taxon
- information content entity
- dataset
- physical entity
- activity
- procedure
- material sample
- biological entity
- gene
- genome
range: string
required: true