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Slot: has_attribute

connects any entity to an attribute

URI: biolink:has_attribute

Applicable Classes

Name Description Modifies Slot
OrganismTaxon A classification of a set of organisms no
Procedure A series of actions conducted in a certain order or manner no
DisplayColor One element of a color palette representing the association between a color a... no
SpatialProportions Spatial distribution of expression, labeling, or anatomical density of a give... no
GenomeAssembly Represents a genome assembly no
ParcellationColorScheme A parcellation color scheme is a versioned release color palette that can be ... no
ImageDataset An image dataset is versioned release of a multidimensional regular grid of m... no
CellTypeTaxonomyCreationProcess The process of organizing cells or clusters into a systematic classification ... no
MatrixFile A digital file containing the representation of full or partial data matrix no
ObservationMatrix A matrix (potentially virtual) of observations no
PhysicalEntity An entity that has material reality (a no
ObservationMatrixCreationProcess The process of aggregating data to create an observation matrix (potentially ... no
Attribute A property or characteristic of an entity no
CellTypeTaxonomy A cell type taxonomy is a systematic classification of cell types and their h... no
Activity An activity is something that occurs over a period of time and acts upon or w... no
ClusteringProcess The process of organizing and classifying observations into groups or cluster... no
ObservationRow One specific row of the observation matrix representing a set of measurements... no
CellTypeTaxon A cell type taxon is a node in a taxonomy no
MaterialSample A sample is a limited quantity of something (e no
Abbreviation Maps an abbreviation string to its decoded meaning no
ParcellationTerm A parcellation term is an individual term within a specific parcellation term... no
GenomeAnnotation Represents a genome annotation no
InformationContentEntity a piece of information that typically describes some topic of discourse or is... no
CellTypeSet A grouping of cell type taxons no
ColorPalette A schematic set of display colors that can be applied to individual component... no
ParcellationTermSet A parcellation term set is the set of parcellation terms within a specific pa... no
AnatomicalAnnotationSet An anatomical annotation set is a versioned release of a set of anatomical an... no
StudyResult A collection of data items from a study that are about a particular study sub... no
BiologicalEntity no
VersionedNamedThing An iteration of the biolink:NamedThing class that stores metadata about the o... no
Gene A region (or regions) that includes all of the sequence elements necessary to... no
Checksum Checksum values associated with digital entities no
AnatomicalSpace An anatomical space is versioned release of a mathematical space with a defin... no
RelativeFrequencyAnalysisResult A result of a relative frequency analysis no
ClusterSet The output of a clustering process where input observations are organized or ... no
Entity Root Biolink Model class for all things and informational relationships, real... no
Genome A genome is the sum of genetic material within a cell or virion no
Cluster One specific cluster from the set of clusters determined by a clustering proc... no
GeneAnnotation Represents a single gene no
ParcellationTerminology A parcellation terminology is a versioned release set of terms that can be us... no
ParcellationAtlas A parcellation atlas is a versioned release reference used to guide experimen... no
NamedThing a databased entity or concept/class no
Dataset an item that refers to a collection of data from a data source no
CellSpecimen ( defined as in BERS) no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/brain-bican/bke-taxonomy

Mappings

Mapping Type Mapped Value
self biolink:has_attribute
native bican:has_attribute
exact SIO:000008
narrow OBAN:association_has_subject_property, OBAN:association_has_object_property, CPT:has_possibly_included_panel_element, DRUGBANK:category, EFO:is_executed_in, HANCESTRO:0301, LOINC:has_action_guidance, LOINC:has_adjustment, LOINC:has_aggregation_view, LOINC:has_approach_guidance, LOINC:has_divisor, LOINC:has_exam, LOINC:has_method, LOINC:has_modality_subtype, LOINC:has_object_guidance, LOINC:has_scale, LOINC:has_suffix, LOINC:has_time_aspect, LOINC:has_time_modifier, LOINC:has_timing_of, NCIT:R88, NCIT:eo_disease_has_property_or_attribute, NCIT:has_data_element, NCIT:has_pharmaceutical_administration_method, NCIT:has_pharmaceutical_basic_dose_form, NCIT:has_pharmaceutical_intended_site, NCIT:has_pharmaceutical_release_characteristics, NCIT:has_pharmaceutical_state_of_matter, NCIT:has_pharmaceutical_transformation, NCIT:is_qualified_by, NCIT:qualifier_applies_to, NCIT:role_has_domain, NCIT:role_has_range, INO:0000154, HANCESTRO:0308, orphanet:C016, orphanet:C017, RO:0000053, RO:0000086, RO:0000087, SNOMED:has_access, SNOMED:has_clinical_course, SNOMED:has_count_of_base_of_active_ingredient, SNOMED:has_dose_form_administration_method, SNOMED:has_dose_form_release_characteristic, SNOMED:has_dose_form_transformation, SNOMED:has_finding_context, SNOMED:has_finding_informer, SNOMED:has_inherent_attribute, SNOMED:has_intent, SNOMED:has_interpretation, SNOMED:has_laterality, SNOMED:has_measurement_method, SNOMED:has_method, SNOMED:has_priority, SNOMED:has_procedure_context, SNOMED:has_process_duration, SNOMED:has_property, SNOMED:has_revision_status, SNOMED:has_scale_type, SNOMED:has_severity, SNOMED:has_specimen, SNOMED:has_state_of_matter, SNOMED:has_subject_relationship_context, SNOMED:has_surgical_approach, SNOMED:has_technique, SNOMED:has_temporal_context, SNOMED:has_time_aspect, SNOMED:has_units, UMLS:has_structural_class, UMLS:has_supported_concept_property, UMLS:has_supported_concept_relationship, UMLS:may_be_qualified_by
close OBI:0001927

LinkML Source

name: has attribute
definition_uri: https://w3id.org/biolink/vocab/has_attribute
description: connects any entity to an attribute
in_subset:
- samples
from_schema: https://w3id.org/brain-bican/bke-taxonomy
exact_mappings:
- SIO:000008
close_mappings:
- OBI:0001927
narrow_mappings:
- OBAN:association_has_subject_property
- OBAN:association_has_object_property
- CPT:has_possibly_included_panel_element
- DRUGBANK:category
- EFO:is_executed_in
- HANCESTRO:0301
- LOINC:has_action_guidance
- LOINC:has_adjustment
- LOINC:has_aggregation_view
- LOINC:has_approach_guidance
- LOINC:has_divisor
- LOINC:has_exam
- LOINC:has_method
- LOINC:has_modality_subtype
- LOINC:has_object_guidance
- LOINC:has_scale
- LOINC:has_suffix
- LOINC:has_time_aspect
- LOINC:has_time_modifier
- LOINC:has_timing_of
- NCIT:R88
- NCIT:eo_disease_has_property_or_attribute
- NCIT:has_data_element
- NCIT:has_pharmaceutical_administration_method
- NCIT:has_pharmaceutical_basic_dose_form
- NCIT:has_pharmaceutical_intended_site
- NCIT:has_pharmaceutical_release_characteristics
- NCIT:has_pharmaceutical_state_of_matter
- NCIT:has_pharmaceutical_transformation
- NCIT:is_qualified_by
- NCIT:qualifier_applies_to
- NCIT:role_has_domain
- NCIT:role_has_range
- INO:0000154
- HANCESTRO:0308
- orphanet:C016
- orphanet:C017
- RO:0000053
- RO:0000086
- RO:0000087
- SNOMED:has_access
- SNOMED:has_clinical_course
- SNOMED:has_count_of_base_of_active_ingredient
- SNOMED:has_dose_form_administration_method
- SNOMED:has_dose_form_release_characteristic
- SNOMED:has_dose_form_transformation
- SNOMED:has_finding_context
- SNOMED:has_finding_informer
- SNOMED:has_inherent_attribute
- SNOMED:has_intent
- SNOMED:has_interpretation
- SNOMED:has_laterality
- SNOMED:has_measurement_method
- SNOMED:has_method
- SNOMED:has_priority
- SNOMED:has_procedure_context
- SNOMED:has_process_duration
- SNOMED:has_property
- SNOMED:has_revision_status
- SNOMED:has_scale_type
- SNOMED:has_severity
- SNOMED:has_specimen
- SNOMED:has_state_of_matter
- SNOMED:has_subject_relationship_context
- SNOMED:has_surgical_approach
- SNOMED:has_technique
- SNOMED:has_temporal_context
- SNOMED:has_time_aspect
- SNOMED:has_units
- UMLS:has_structural_class
- UMLS:has_supported_concept_property
- UMLS:has_supported_concept_relationship
- UMLS:may_be_qualified_by
rank: 1000
domain: entity
slot_uri: biolink:has_attribute
alias: has_attribute
owner: entity
domain_of:
- entity
- attribute
- named thing
- organism taxon
- study result
- relative frequency analysis result
- information content entity
- dataset
- physical entity
- activity
- procedure
- material sample
- biological entity
- gene
- genome
range: attribute
multivalued: true