Slot: dissociated_cell_oligo_name

Name of cell source oligo used in cell plexing. The oligo molecularly tags all the cells in the dissociated cell sample and allows separate dissociated cell samples to be combined downstream in the barcoded cell sample. The oligo name is associated with a sequence in a lookup table. This sequence will be needed during alignment to associate reads with the parent source dissociated cell sample.

URI: bican:184abbaf-baff-4b5f-b51e-dd38de6006af

Applicable Classes

Name	Description	Modifies Slot
DissociatedCellSample	A collection of dissociated cells or nuclei derived from dissociation of a ti...	no

Properties

• Range: DissociatedCellSampleCellLabelBarcode

Identifier and Mapping Information

Schema Source

• from schema: https://identifiers.org/brain-bican/library-generation-schema

Mappings

Mapping Type	Mapped Value
self	bican:184abbaf-baff-4b5f-b51e-dd38de6006af
native	bican:dissociated_cell_oligo_name
exact	NIMP:PD-CFCFPS27

LinkML Source

name: dissociated_cell_oligo_name
local_names:
  NIMP:
    local_name_source: NIMP
    local_name_value: dissociated_cell_sample_cell_label_barcode
description: Name of cell source oligo used in cell plexing.  The oligo molecularly
  tags all the cells in the dissociated cell sample and allows separate dissociated
  cell samples to be combined downstream in the barcoded cell sample.  The oligo name
  is associated with a sequence in a lookup table.  This sequence will be needed during
  alignment to associate reads with the parent source dissociated cell sample.
from_schema: https://identifiers.org/brain-bican/library-generation-schema
exact_mappings:
- NIMP:PD-CFCFPS27
rank: 1000
slot_uri: bican:184abbaf-baff-4b5f-b51e-dd38de6006af
alias: dissociated_cell_oligo_name
owner: DissociatedCellSample
domain_of:
- DissociatedCellSample
range: dissociated_cell_sample_cell_label_barcode