Anatomical Structure
erDiagram
OntologyClass {
string id
}
Annotation {
}
QuantityValue {
unit has_unit
double has_numeric_value
}
Attribute {
string id
curieList category
stringList type
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
label type attribute_name
iri type iri
label type name
}
Entity {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
}
NamedThing {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
TaxonomicRank {
string id
}
OrganismTaxon {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
InformationContentEntity {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
string license
string rights
string format
date creation_date
}
Dataset {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
string license
string rights
string format
date creation_date
}
PhysicalEssenceOrOccurrent {
}
PhysicalEssence {
}
PhysicalEntity {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
Occurrent {
}
ActivityAndBehavior {
}
Activity {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
Procedure {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
SubjectOfInvestigation {
}
MaterialSample {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ThingWithTaxon {
label type in_taxon_label
}
BiologicalEntity {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
label type in_taxon_label
}
GenomicEntity {
biological sequence has_biological_sequence
}
ChemicalEntityOrGeneOrGeneProduct {
}
MacromolecularMachineMixin {
label type name
}
GeneOrGeneProduct {
label type name
}
Gene {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
label type full_name
label typeList synonym
label type in_taxon_label
string symbol
uriorcurieList xref
biological sequence has_biological_sequence
}
Genome {
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
label type in_taxon_label
biological sequence has_biological_sequence
}
VersionedNamedThing {
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
Checksum {
DigestType checksum_algorithm
string value
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
}
ImageDataset {
ANATOMICAL_DIRECTION x_direction
ANATOMICAL_DIRECTION y_direction
ANATOMICAL_DIRECTION z_direction
integer x_size
integer y_size
integer z_size
float x_resolution
float y_resolution
float z_resolution
DISTANCE_UNIT unit
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
AnatomicalSpace {
string measures
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ParcellationTerminology {
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ParcellationTermSet {
integer ordinal
string part_of_parcellation_terminology
string has_parent_parcellation_term_set
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ParcellationTerm {
integer ordinal
string symbol
string part_of_parcellation_term_set
string has_parent_parcellation_term
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ParcellationColorScheme {
string subject_parcellation_terminology
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ParcellationColorAssignment {
string subject_parcellation_term
string part_of_parcellation_color_scheme
string color
}
AnatomicalAnnotationSet {
string parameterizes
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
ParcellationAnnotation {
string part_of_anatomical_annotation_set
string internal_identifier
integer voxel_count
}
ParcellationAnnotationTermMap {
string subject_parcellation_term
string subject_parcellation_annotation
}
ParcellationAtlas {
string has_anatomical_space
string has_anatomical_annotation_set
string has_parcellation_terminology
string specialization_of
string version
string id
iri type iri
curieList category
stringList type
label type name
narrative text description
boolean deprecated
stringList provided_by
uriorcurieList xref
label type full_name
label typeList synonym
}
Attribute ||--}o Attribute : "has attribute"
Attribute ||--|| OntologyClass : "has attribute type"
Attribute ||--}o QuantityValue : "has quantitative value"
Attribute ||--|o NamedThing : "has qualitative value"
Entity ||--}o Attribute : "has attribute"
NamedThing ||--}o Attribute : "has attribute"
OrganismTaxon ||--}o Attribute : "has attribute"
OrganismTaxon ||--|o TaxonomicRank : "has taxonomic rank"
InformationContentEntity ||--}o Attribute : "has attribute"
Dataset ||--}o Attribute : "has attribute"
PhysicalEntity ||--}o Attribute : "has attribute"
Activity ||--}o Attribute : "has attribute"
Procedure ||--}o Attribute : "has attribute"
MaterialSample ||--}o Attribute : "has attribute"
ThingWithTaxon ||--}o OrganismTaxon : "in taxon"
BiologicalEntity ||--}o Attribute : "has attribute"
BiologicalEntity ||--}o OrganismTaxon : "in taxon"
Gene ||--}o Attribute : "has attribute"
Gene ||--}o OrganismTaxon : "in taxon"
Genome ||--}o Attribute : "has attribute"
Genome ||--}o OrganismTaxon : "in taxon"
VersionedNamedThing ||--|o VersionedNamedThing : "revision_of"
VersionedNamedThing ||--}o Attribute : "has attribute"
Checksum ||--}o Attribute : "has attribute"
ImageDataset ||--|o VersionedNamedThing : "revision_of"
ImageDataset ||--}o Attribute : "has attribute"
AnatomicalSpace ||--|o VersionedNamedThing : "revision_of"
AnatomicalSpace ||--}o Attribute : "has attribute"
ParcellationTerminology ||--|o VersionedNamedThing : "revision_of"
ParcellationTerminology ||--}o Attribute : "has attribute"
ParcellationTermSet ||--}o Attribute : "has attribute"
ParcellationTerm ||--}o Attribute : "has attribute"
ParcellationColorScheme ||--|o VersionedNamedThing : "revision_of"
ParcellationColorScheme ||--}o Attribute : "has attribute"
AnatomicalAnnotationSet ||--|o VersionedNamedThing : "revision_of"
AnatomicalAnnotationSet ||--}o Attribute : "has attribute"
ParcellationAtlas ||--|o VersionedNamedThing : "revision_of"
ParcellationAtlas ||--}o Attribute : "has attribute"