Class: ProvActivity
An activity is something that occurs over a period of time and acts upon or with entities; it may include consuming, processing, transforming, modifying, relocating, using, or generating entities.
URI: prov:Activity
classDiagram
class ProvActivity
click ProvActivity href "../ProvActivity"
ProvActivity <|-- DissectionRoiDelineation
click DissectionRoiDelineation href "../DissectionRoiDelineation"
ProvActivity <|-- TissueDissection
click TissueDissection href "../TissueDissection"
ProvActivity <|-- CellDissociation
click CellDissociation href "../CellDissociation"
ProvActivity <|-- CellEnrichment
click CellEnrichment href "../CellEnrichment"
ProvActivity <|-- EnrichedCellSampleSplitting
click EnrichedCellSampleSplitting href "../EnrichedCellSampleSplitting"
ProvActivity <|-- CellBarcoding
click CellBarcoding href "../CellBarcoding"
ProvActivity <|-- CdnaAmplification
click CdnaAmplification href "../CdnaAmplification"
ProvActivity <|-- LibraryConstruction
click LibraryConstruction href "../LibraryConstruction"
ProvActivity <|-- LibraryPooling
click LibraryPooling href "../LibraryPooling"
ProvActivity : used
ProvActivity --> "0..1" ProvEntity : used
click ProvEntity href "../ProvEntity"
Slots
| Name | Cardinality and Range | Description | Inheritance |
|---|---|---|---|
| used | 0..1 ProvEntity |
Usage is the beginning of utilizing an entity by an activity | direct |
Mixin Usage
| mixed into | description |
|---|---|
| DissectionRoiDelineation | The process of outlining a region of interest on a brain slab image to guide ... |
| TissueDissection | The process of dissecting a tissue sample from a brain slab guided by a disse... |
| CellDissociation | The process of generating dissociated cells from an input tissue sample |
| CellEnrichment | The process of enriching a dissociated cell sample by including or excluding ... |
| EnrichedCellSampleSplitting | The process of splitting an enriched cell sample into several portions |
| CellBarcoding | The process of adding a molecular barcode to individual cells in a sample |
| CdnaAmplification | The process of creating a collection of cDNA molecules derived and amplified ... |
| LibraryConstruction | The process of constructing a library from input material (such as amplified ... |
| LibraryPooling | The process of constructing of a libray pool by combining library aliquots fr... |
Usages
| used by | used in | type | used |
|---|---|---|---|
| Donor | was_generated_by | range | ProvActivity |
| BrainSlab | was_generated_by | range | ProvActivity |
| EnrichedCellSample | was_generated_by | range | ProvActivity |
| LibraryAliquot | was_generated_by | range | ProvActivity |
| ProvEntity | was_generated_by | range | ProvActivity |
Identifier and Mapping Information
Schema Source
- from schema: https://identifiers.org/brain-bican/library-generation-schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | prov:Activity |
| native | bican:ProvActivity |
LinkML Source
Direct
name: ProvActivity
description: An activity is something that occurs over a period of time and acts upon
or with entities; it may include consuming, processing, transforming, modifying,
relocating, using, or generating entities.
from_schema: https://identifiers.org/brain-bican/library-generation-schema
mixin: true
slots:
- used
class_uri: prov:Activity
Induced
name: ProvActivity
description: An activity is something that occurs over a period of time and acts upon
or with entities; it may include consuming, processing, transforming, modifying,
relocating, using, or generating entities.
from_schema: https://identifiers.org/brain-bican/library-generation-schema
mixin: true
attributes:
used:
name: used
description: Usage is the beginning of utilizing an entity by an activity. Before
usage, the activity had not begun to utilize this entity and could not have
been affected by the entity.
from_schema: https://identifiers.org/brain-bican/library-generation-schema
rank: 1000
slot_uri: prov:used
alias: used
owner: ProvActivity
domain_of:
- DissectionRoiDelineation
- TissueDissection
- CellDissociation
- CellEnrichment
- EnrichedCellSampleSplitting
- CellBarcoding
- CdnaAmplification
- LibraryConstruction
- LibraryPooling
- ProvActivity
range: ProvEntity
class_uri: prov:Activity