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Class: ParcellationTermSet

A parcellation term set is the set of parcellation terms within a specific parcellation terminology. A parcellation term set belongs to one and only one parcellation terminology and each parcellation term in a parcellation terminology belongs to one and only one term set. If the parcellation terminology is a taxonomy, parcellation term sets can be used to represent taxonomic ranks. For consistency, if the terminology does not have the notion of taxonomic ranks, all terms are grouped into a single parcellation term set.

URI: AnS:ParcellationTermSet

classDiagram class ParcellationTermSet click ParcellationTermSet href "../ParcellationTermSet" NamedThing <|-- ParcellationTermSet click NamedThing href "../NamedThing" ParcellationTermSet : category ParcellationTermSet : description ParcellationTermSet : has_parent_parcellation_term_set ParcellationTermSet : id ParcellationTermSet : name ParcellationTermSet : ordinal ParcellationTermSet : part_of_parcellation_terminology

Inheritance

Slots

Name Cardinality and Range Description Inheritance
part_of_parcellation_terminology 1
String or 
ParcellationTerminology or 
String		 Reference to the parcellation terminology for which the parcellation term set... direct
ordinal 0..1
Integer		 Ordinal of the parcellation term set among other term sets within the context... direct
has_parent_parcellation_term_set 0..1
String or 
ParcellationTermSet or 
String		 Reference to the parent parcellation term set for which the parcellation term... direct
id 1
Uriorcurie		 NamedThing
name 1
String		 NamedThing
description 1
String		 NamedThing
category *
Uriorcurie		 NamedThing

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/my-org/anatomical-structure-schema

Mappings

Mapping Type Mapped Value
self AnS:ParcellationTermSet
native AnS:ParcellationTermSet

LinkML Source

Direct

name: ParcellationTermSet
description: A parcellation term set is the set of parcellation terms within a specific
  parcellation terminology.  A parcellation term set belongs to one and only one parcellation
  terminology and each parcellation  term in a parcellation terminology belongs to
  one and only one term set.  If the parcellation terminology is a taxonomy, parcellation
  term sets can be used to represent  taxonomic ranks. For consistency, if the terminology
  does not have the notion of taxonomic ranks,  all terms are grouped into a single
  parcellation term set.
from_schema: https://w3id.org/my-org/anatomical-structure-schema
is_a: NamedThing
attributes:
  part_of_parcellation_terminology:
    name: part_of_parcellation_terminology
    description: Reference to the parcellation terminology for which the parcellation
      term set partitions.
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ParcellationTermSet
    required: true
    any_of:
    - range: ParcellationTerminology
    - range: string
  ordinal:
    name: ordinal
    description: Ordinal of the parcellation term set among other term sets within
      the context of the  associated parcellation terminology.
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ParcellationTermSet
    - ParcellationTerm
    range: integer
    minimum_value: 0
  has_parent_parcellation_term_set:
    name: has_parent_parcellation_term_set
    description: Reference to the parent parcellation term set for which the parcellation
      term set is a child  (lower taxonomic rank) of.
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ParcellationTermSet
    any_of:
    - range: ParcellationTermSet
    - range: string

Induced

name: ParcellationTermSet
description: A parcellation term set is the set of parcellation terms within a specific
  parcellation terminology.  A parcellation term set belongs to one and only one parcellation
  terminology and each parcellation  term in a parcellation terminology belongs to
  one and only one term set.  If the parcellation terminology is a taxonomy, parcellation
  term sets can be used to represent  taxonomic ranks. For consistency, if the terminology
  does not have the notion of taxonomic ranks,  all terms are grouped into a single
  parcellation term set.
from_schema: https://w3id.org/my-org/anatomical-structure-schema
is_a: NamedThing
attributes:
  part_of_parcellation_terminology:
    name: part_of_parcellation_terminology
    description: Reference to the parcellation terminology for which the parcellation
      term set partitions.
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    alias: part_of_parcellation_terminology
    owner: ParcellationTermSet
    domain_of:
    - ParcellationTermSet
    range: string
    required: true
    any_of:
    - range: ParcellationTerminology
    - range: string
  ordinal:
    name: ordinal
    description: Ordinal of the parcellation term set among other term sets within
      the context of the  associated parcellation terminology.
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    alias: ordinal
    owner: ParcellationTermSet
    domain_of:
    - ParcellationTermSet
    - ParcellationTerm
    range: integer
    minimum_value: 0
  has_parent_parcellation_term_set:
    name: has_parent_parcellation_term_set
    description: Reference to the parent parcellation term set for which the parcellation
      term set is a child  (lower taxonomic rank) of.
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    alias: has_parent_parcellation_term_set
    owner: ParcellationTermSet
    domain_of:
    - ParcellationTermSet
    range: string
    any_of:
    - range: ParcellationTermSet
    - range: string
  id:
    name: id
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    identifier: true
    alias: id
    owner: ParcellationTermSet
    domain_of:
    - NamedThing
    range: uriorcurie
    required: true
  name:
    name: name
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    alias: name
    owner: ParcellationTermSet
    domain_of:
    - NamedThing
    range: string
    required: true
  description:
    name: description
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    alias: description
    owner: ParcellationTermSet
    domain_of:
    - NamedThing
    range: string
    required: true
  category:
    name: category
    from_schema: https://w3id.org/my-org/anatomical-structure-schema
    rank: 1000
    multivalued: true
    designates_type: true
    alias: category
    owner: ParcellationTermSet
    domain_of:
    - NamedThing
    is_class_field: true
    range: uriorcurie