Skip to content

Class: MacromolecularMachineMixin

A union of gene locus, gene product, and macromolecular complex. These are the basic units of function in a cell. They either carry out individual biological activities, or they encode molecules which do this.

URI: biolink:MacromolecularMachineMixin

classDiagram class MacromolecularMachineMixin click MacromolecularMachineMixin href "../MacromolecularMachineMixin" MacromolecularMachineMixin <|-- GeneOrGeneProduct click GeneOrGeneProduct href "../GeneOrGeneProduct" MacromolecularMachineMixin : name

Inheritance

Slots

Name Cardinality and Range Description Inheritance
name 0..1
SymbolType		 genes are typically designated by a short symbol and a full name direct

Mixin Usage

mixed into description

Usages

used by used in type used
GeneOrGeneProduct macromolecular_machine_mixin_name domain MacromolecularMachineMixin
Gene macromolecular_machine_mixin_name domain MacromolecularMachineMixin
GeneAnnotation macromolecular_machine_mixin_name domain MacromolecularMachineMixin

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/brain-bican/bke-taxonomy

Mappings

Mapping Type Mapped Value
self biolink:MacromolecularMachineMixin
native bican:MacromolecularMachineMixin

LinkML Source

Direct

name: macromolecular machine mixin
definition_uri: https://w3id.org/biolink/vocab/MacromolecularMachineMixin
description: A union of gene locus, gene product, and macromolecular complex. These
  are the basic units of function in a cell. They either carry out individual biological
  activities, or they encode molecules which do this.
from_schema: https://w3id.org/brain-bican/bke-taxonomy
mixin: true
slots:
- name
slot_usage:
  name:
    name: name
    description: genes are typically designated by a short symbol and a full name.
      We map the symbol to the default display name and use an additional slot for
      full name
    range: symbol type
class_uri: biolink:MacromolecularMachineMixin

Induced

name: macromolecular machine mixin
definition_uri: https://w3id.org/biolink/vocab/MacromolecularMachineMixin
description: A union of gene locus, gene product, and macromolecular complex. These
  are the basic units of function in a cell. They either carry out individual biological
  activities, or they encode molecules which do this.
from_schema: https://w3id.org/brain-bican/bke-taxonomy
mixin: true
slot_usage:
  name:
    name: name
    description: genes are typically designated by a short symbol and a full name.
      We map the symbol to the default display name and use an additional slot for
      full name
    range: symbol type
attributes:
  name:
    name: name
    definition_uri: https://w3id.org/biolink/vocab/name
    description: genes are typically designated by a short symbol and a full name.
      We map the symbol to the default display name and use an additional slot for
      full name
    in_subset:
    - translator_minimal
    - samples
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    aliases:
    - label
    - display name
    - title
    mappings:
    - rdfs:label
    exact_mappings:
    - gff3:Name
    - gpi:DB_Object_Name
    narrow_mappings:
    - dct:title
    - WIKIDATA_PROPERTY:P1476
    rank: 1000
    domain: entity
    slot_uri: rdfs:label
    alias: name
    owner: macromolecular machine mixin
    domain_of:
    - attribute
    - entity
    - macromolecular machine mixin
    - CellTypeTaxonomy
    - CellTypeSet
    - CellTypeTaxon
    - ClusterSet
    - Cluster
    - ColorPalette
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: symbol type
class_uri: biolink:MacromolecularMachineMixin