Enum: LibraryTechnique

URI: LibraryTechnique

Permissible Values

Value	Meaning	Description
SMARTSeqSC	NIMP:PD-AJAJCN35	SMARTSeqSC
SmartSeq3	NIMP:PD-AJAJCN35	SmartSeq3
10xV3.1	NIMP:PD-AJAJCN35	10xV3
10xV3.1_HT	NIMP:PD-AJAJCN35	10xV3
10xMultiome;GEX	NIMP:PD-AJAJCN35	10xMultiome;GEX
10xMultiome;ATAC	NIMP:PD-AJAJCN35	10xMultiome;ATAC
10xATAC_V2.0	NIMP:PD-AJAJCN35	10xATAC_V2
10XMultiome-CellHashing;GEX	NIMP:PD-AJAJCN35	10XMultiome-CellHashing;GEX
10XMultiome-CellHashing;ATAC	NIMP:PD-AJAJCN35	10XMultiome-CellHashing;ATAC
10XMultiome-Cell Hashing;Barcode	NIMP:PD-AJAJCN35	10XMultiome-Cell Hashing;Barcode
10xV3.1_CellPlex;GEX	NIMP:PD-AJAJCN35	10xV3
10xV3.1_CellPlex;Barcode	NIMP:PD-AJAJCN35	10xV3
10xV3.1_HT_CellPlex;GEX	NIMP:PD-AJAJCN35	10xV3
10xV3.1_HT_CellPlex;Barcode	NIMP:PD-AJAJCN35	10xV3
MethylC-Seq	NIMP:PD-AJAJCN35	MethylC-Seq
snm3C-seq	NIMP:PD-AJAJCN35	snm3C-seq
snmCT-seq	NIMP:PD-AJAJCN35	snmCT-seq
scATAC-seq	NIMP:PD-AJAJCN35	scATAC-seq
MERFISH	NIMP:PD-AJAJCN35	MERFISH
Slide-seq MERFISH	NIMP:PD-AJAJCN35	Slide-seq MERFISH
whole brain MERFISH	NIMP:PD-AJAJCN35	whole brain MERFISH
DBiT RNA-seq	NIMP:PD-AJAJCN35	DBiT RNA-seq
DBiT ATAC-seq	NIMP:PD-AJAJCN35	DBiT ATAC-seq

Slots

Name	Description
library_construction_method	Standardized nomenclature to describe the specific library method used

Identifier and Mapping Information

Schema Source

• from schema: https://identifiers.org/brain-bican/library-generation-schema

LinkML Source

name: library_technique
from_schema: https://identifiers.org/brain-bican/library-generation-schema
rank: 1000
permissible_values:
  SMARTSeqSC:
    text: SMARTSeqSC
    description: SMARTSeqSC
    meaning: NIMP:PD-AJAJCN35
  SmartSeq3:
    text: SmartSeq3
    description: SmartSeq3
    meaning: NIMP:PD-AJAJCN35
  10xV3.1:
    text: 10xV3.1
    description: 10xV3.1
    meaning: NIMP:PD-AJAJCN35
  10xV3.1_HT:
    text: 10xV3.1_HT
    description: 10xV3.1_HT
    meaning: NIMP:PD-AJAJCN35
  10xMultiome;GEX:
    text: 10xMultiome;GEX
    description: 10xMultiome;GEX
    meaning: NIMP:PD-AJAJCN35
  10xMultiome;ATAC:
    text: 10xMultiome;ATAC
    description: 10xMultiome;ATAC
    meaning: NIMP:PD-AJAJCN35
  10xATAC_V2.0:
    text: 10xATAC_V2.0
    description: 10xATAC_V2.0
    meaning: NIMP:PD-AJAJCN35
  10XMultiome-CellHashing;GEX:
    text: 10XMultiome-CellHashing;GEX
    description: 10XMultiome-CellHashing;GEX
    meaning: NIMP:PD-AJAJCN35
  10XMultiome-CellHashing;ATAC:
    text: 10XMultiome-CellHashing;ATAC
    description: 10XMultiome-CellHashing;ATAC
    meaning: NIMP:PD-AJAJCN35
  10XMultiome-Cell Hashing;Barcode:
    text: 10XMultiome-Cell Hashing;Barcode
    description: 10XMultiome-Cell Hashing;Barcode
    meaning: NIMP:PD-AJAJCN35
  10xV3.1_CellPlex;GEX:
    text: 10xV3.1_CellPlex;GEX
    description: 10xV3.1_CellPlex;GEX
    meaning: NIMP:PD-AJAJCN35
  10xV3.1_CellPlex;Barcode:
    text: 10xV3.1_CellPlex;Barcode
    description: 10xV3.1_CellPlex;Barcode
    meaning: NIMP:PD-AJAJCN35
  10xV3.1_HT_CellPlex;GEX:
    text: 10xV3.1_HT_CellPlex;GEX
    description: 10xV3.1_HT_CellPlex;GEX
    meaning: NIMP:PD-AJAJCN35
  10xV3.1_HT_CellPlex;Barcode:
    text: 10xV3.1_HT_CellPlex;Barcode
    description: 10xV3.1_HT_CellPlex;Barcode
    meaning: NIMP:PD-AJAJCN35
  MethylC-Seq:
    text: MethylC-Seq
    description: MethylC-Seq
    meaning: NIMP:PD-AJAJCN35
  snm3C-seq:
    text: snm3C-seq
    description: snm3C-seq
    meaning: NIMP:PD-AJAJCN35
  snmCT-seq:
    text: snmCT-seq
    description: snmCT-seq
    meaning: NIMP:PD-AJAJCN35
  scATAC-seq:
    text: scATAC-seq
    description: scATAC-seq
    meaning: NIMP:PD-AJAJCN35
  MERFISH:
    text: MERFISH
    description: MERFISH
    meaning: NIMP:PD-AJAJCN35
  Slide-seq MERFISH:
    text: Slide-seq MERFISH
    description: Slide-seq MERFISH
    meaning: NIMP:PD-AJAJCN35
  whole brain MERFISH:
    text: whole brain MERFISH
    description: whole brain MERFISH
    meaning: NIMP:PD-AJAJCN35
  DBiT RNA-seq:
    text: DBiT RNA-seq
    description: DBiT RNA-seq
    meaning: NIMP:PD-AJAJCN35
  DBiT ATAC-seq:
    text: DBiT ATAC-seq
    description: DBiT ATAC-seq
    meaning: NIMP:PD-AJAJCN35