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Class: ImageDataset

An image dataset is versioned release of a multidimensional regular grid of measurements and metadata required for a morphological representation of an entity such as an anatomical structure (ref: OBI_0003327, RRID:SCR_006266)

URI: bican:ImageDataset

classDiagram class ImageDataset click ImageDataset href "../ImageDataset" VersionedNamedThing <|-- ImageDataset click VersionedNamedThing href "../VersionedNamedThing" ImageDataset : category ImageDataset : deprecated ImageDataset : description ImageDataset : equivalent_identifiers ImageDataset : full_name ImageDataset : has_attribute ImageDataset --> "*" Attribute : has_attribute click Attribute href "../Attribute" ImageDataset : id ImageDataset : information_content ImageDataset : iri ImageDataset : name ImageDataset : named_thing_category ImageDataset : provided_by ImageDataset : revision_of ImageDataset --> "0..1" VersionedNamedThing : revision_of click VersionedNamedThing href "../VersionedNamedThing" ImageDataset : synonym ImageDataset : type ImageDataset : unit ImageDataset --> "0..1" DISTANCEUNIT : unit click DISTANCEUNIT href "../DISTANCEUNIT" ImageDataset : version ImageDataset : x_direction ImageDataset --> "0..1" ANATOMICALDIRECTION : x_direction click ANATOMICALDIRECTION href "../ANATOMICALDIRECTION" ImageDataset : x_resolution ImageDataset : x_size ImageDataset : xref ImageDataset : y_direction ImageDataset --> "0..1" ANATOMICALDIRECTION : y_direction click ANATOMICALDIRECTION href "../ANATOMICALDIRECTION" ImageDataset : y_resolution ImageDataset : y_size ImageDataset : z_direction ImageDataset --> "0..1" ANATOMICALDIRECTION : z_direction click ANATOMICALDIRECTION href "../ANATOMICALDIRECTION" ImageDataset : z_resolution ImageDataset : z_size

Inheritance

Slots

Name Cardinality and Range Description Inheritance
x_direction 0..1
ANATOMICALDIRECTION		 A controlled vocabulary attribute defining the x axis direction in terms of a... direct
y_direction 0..1
ANATOMICALDIRECTION		 A controlled vocabulary attribute defining the y axis direction in terms of a... direct
z_direction 0..1
ANATOMICALDIRECTION		 A controlled vocabulary attribute defining the z axis direction in terms of a... direct
x_size 0..1
Integer		 The number of pixels/voxels (size) along the x axis direct
y_size 0..1
Integer		 The number of pixels/voxels (size) along the y axis direct
z_size 0..1
Integer		 The number of pixels/voxels (size) along the y axis direct
x_resolution 0..1
Float		 The resolution (length / pixel) in along the x axis (numerical value part) direct
y_resolution 0..1
Float		 The resolution (length / pixel) in along the y axis (numerical value part) direct
z_resolution 0..1
Float		 The resolution (length / pixel) in along the z axis (numerical value part) direct
unit 0..1
DISTANCEUNIT		 A controlled vocabulary attribute defining the length unit of the x, y, and z... direct
version 1
String		 VersionedNamedThing
revision_of 0..1
VersionedNamedThing or 
ImageDataset or 
String		 VersionedNamedThing
id 1
String		 A unique identifier for an entity NamedThing, Entity
iri 0..1
IriType		 An IRI for an entity NamedThing, Entity
type *
String		 NamedThing, Entity
name 0..1
LabelType		 A human-readable name for an attribute or entity NamedThing, Entity
description 0..1
NarrativeText		 a human-readable description of an entity NamedThing, Entity
has_attribute *
Attribute		 connects any entity to an attribute NamedThing, Entity
deprecated 0..1
Boolean		 A boolean flag indicating that an entity is no longer considered current or v... NamedThing, Entity
provided_by *
String		 The value in this node property represents the knowledge provider that create... NamedThing
xref *
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... NamedThing
full_name 0..1
LabelType		 a long-form human readable name for a thing NamedThing
synonym *
LabelType		 Alternate human-readable names for a thing NamedThing
information_content 0..1
Float		 Information content (IC) value for a term, primarily from Automats NamedThing
equivalent_identifiers *
Uriorcurie		 A set of identifiers that are considered equivalent to the primary identifier... NamedThing
named_thing_category 1..*
Uriorcurie		 Name of the high level ontology class in which this entity is categorized NamedThing
category 1..*
Uriorcurie		 Name of the high level ontology class in which this entity is categorized Entity

Usages

used by used in type used
ImageDataset revision_of any_of[range] ImageDataset
AnatomicalSpace measures any_of[range] ImageDataset

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/brain-bican/bke-taxonomy

Mappings

Mapping Type Mapped Value
self bican:ImageDataset
native bican:ImageDataset

LinkML Source

Direct

name: ImageDataset
description: 'An image dataset is versioned release of a multidimensional regular
  grid of measurements  and metadata required for a morphological representation of
  an entity such as an anatomical  structure (ref: OBI_0003327, RRID:SCR_006266)'
from_schema: https://w3id.org/brain-bican/bke-taxonomy
is_a: VersionedNamedThing
slot_usage:
  revision_of:
    name: revision_of
    any_of:
    - range: ImageDataset
    - range: string
attributes:
  x_direction:
    name: x_direction
    description: A controlled vocabulary attribute defining the x axis direction in
      terms of anatomical  direction.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: ANATOMICAL_DIRECTION
  y_direction:
    name: y_direction
    description: A controlled vocabulary attribute defining the y axis direction in
      terms of anatomical  direction.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: ANATOMICAL_DIRECTION
  z_direction:
    name: z_direction
    description: A controlled vocabulary attribute defining the z axis direction in
      terms of anatomical  direction.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: ANATOMICAL_DIRECTION
  x_size:
    name: x_size
    description: The number of pixels/voxels (size) along the x axis.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: integer
    minimum_value: 1
  y_size:
    name: y_size
    description: The number of pixels/voxels (size) along the y axis.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: integer
    minimum_value: 1
  z_size:
    name: z_size
    description: The number of pixels/voxels (size) along the y axis.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: integer
    minimum_value: 1
  x_resolution:
    name: x_resolution
    description: The resolution (length / pixel) in along the x axis (numerical value
      part).
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: float
    structured_pattern:
      syntax: '{PositiveFloat}'
  y_resolution:
    name: y_resolution
    description: The resolution (length / pixel) in along the y axis (numerical value
      part).
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: float
    structured_pattern:
      syntax: '{PositiveFloat}'
  z_resolution:
    name: z_resolution
    description: The resolution (length / pixel) in along the z axis (numerical value
      part).
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: float
    structured_pattern:
      syntax: '{PositiveFloat}'
  unit:
    name: unit
    description: A controlled vocabulary attribute defining the length unit of the
      x, y, and z  resolution values.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    domain_of:
    - ImageDataset
    range: DISTANCE_UNIT

Induced

name: ImageDataset
description: 'An image dataset is versioned release of a multidimensional regular
  grid of measurements  and metadata required for a morphological representation of
  an entity such as an anatomical  structure (ref: OBI_0003327, RRID:SCR_006266)'
from_schema: https://w3id.org/brain-bican/bke-taxonomy
is_a: VersionedNamedThing
slot_usage:
  revision_of:
    name: revision_of
    any_of:
    - range: ImageDataset
    - range: string
attributes:
  x_direction:
    name: x_direction
    description: A controlled vocabulary attribute defining the x axis direction in
      terms of anatomical  direction.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: x_direction
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: ANATOMICAL_DIRECTION
  y_direction:
    name: y_direction
    description: A controlled vocabulary attribute defining the y axis direction in
      terms of anatomical  direction.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: y_direction
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: ANATOMICAL_DIRECTION
  z_direction:
    name: z_direction
    description: A controlled vocabulary attribute defining the z axis direction in
      terms of anatomical  direction.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: z_direction
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: ANATOMICAL_DIRECTION
  x_size:
    name: x_size
    description: The number of pixels/voxels (size) along the x axis.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: x_size
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: integer
    minimum_value: 1
  y_size:
    name: y_size
    description: The number of pixels/voxels (size) along the y axis.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: y_size
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: integer
    minimum_value: 1
  z_size:
    name: z_size
    description: The number of pixels/voxels (size) along the y axis.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: z_size
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: integer
    minimum_value: 1
  x_resolution:
    name: x_resolution
    description: The resolution (length / pixel) in along the x axis (numerical value
      part).
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: x_resolution
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: float
    structured_pattern:
      syntax: '{PositiveFloat}'
  y_resolution:
    name: y_resolution
    description: The resolution (length / pixel) in along the y axis (numerical value
      part).
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: y_resolution
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: float
    structured_pattern:
      syntax: '{PositiveFloat}'
  z_resolution:
    name: z_resolution
    description: The resolution (length / pixel) in along the z axis (numerical value
      part).
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: z_resolution
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: float
    structured_pattern:
      syntax: '{PositiveFloat}'
  unit:
    name: unit
    description: A controlled vocabulary attribute defining the length unit of the
      x, y, and z  resolution values.
    from_schema: https://identifiers.org/brain-bican/anatomical-structure-schema
    rank: 1000
    alias: unit
    owner: ImageDataset
    domain_of:
    - ImageDataset
    range: DISTANCE_UNIT
  version:
    name: version
    definition_uri: https://w3id.org/biolink/vocab/version
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    broad_mappings:
    - pav:version
    - owl:versionInfo
    rank: 1000
    is_a: node property
    domain: dataset
    slot_uri: biolink:version
    alias: version
    owner: ImageDataset
    domain_of:
    - VersionedNamedThing
    - GenomeAnnotation
    - GenomeAssembly
    range: string
    required: true
  revision_of:
    name: revision_of
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    rank: 1000
    alias: revision_of
    owner: ImageDataset
    domain_of:
    - VersionedNamedThing
    range: VersionedNamedThing
    any_of:
    - range: ImageDataset
    - range: string
  id:
    name: id
    definition_uri: https://w3id.org/biolink/vocab/id
    description: A unique identifier for an entity. Must be either a CURIE shorthand
      for a URI or a complete URI
    in_subset:
    - translator_minimal
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    exact_mappings:
    - AGRKB:primaryId
    - gff3:ID
    - gpi:DB_Object_ID
    rank: 1000
    domain: entity
    slot_uri: biolink:id
    identifier: true
    alias: id
    owner: ImageDataset
    domain_of:
    - ontology class
    - entity
    - CellTypeTaxonomy
    - CellTypeSet
    - CellTypeTaxon
    - ClusterSet
    - Cluster
    - Abbreviation
    - ColorPalette
    - DisplayColor
    - attribute
    - named thing
    - taxonomic rank
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: string
    required: true
  iri:
    name: iri
    definition_uri: https://w3id.org/biolink/vocab/iri
    description: An IRI for an entity. This is determined by the id using expansion
      rules.
    in_subset:
    - translator_minimal
    - samples
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    exact_mappings:
    - WIKIDATA_PROPERTY:P854
    rank: 1000
    slot_uri: biolink:iri
    alias: iri
    owner: ImageDataset
    domain_of:
    - attribute
    - entity
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: iri type
  type:
    name: type
    definition_uri: https://w3id.org/biolink/vocab/type
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    mappings:
    - rdf:type
    exact_mappings:
    - gff3:type
    - gpi:DB_Object_Type
    rank: 1000
    domain: entity
    slot_uri: rdf:type
    alias: type
    owner: ImageDataset
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: string
    multivalued: true
  name:
    name: name
    definition_uri: https://w3id.org/biolink/vocab/name
    description: A human-readable name for an attribute or entity.
    in_subset:
    - translator_minimal
    - samples
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    aliases:
    - label
    - display name
    - title
    mappings:
    - rdfs:label
    exact_mappings:
    - gff3:Name
    - gpi:DB_Object_Name
    narrow_mappings:
    - dct:title
    - WIKIDATA_PROPERTY:P1476
    rank: 1000
    domain: entity
    slot_uri: rdfs:label
    alias: name
    owner: ImageDataset
    domain_of:
    - attribute
    - entity
    - macromolecular machine mixin
    - CellTypeTaxonomy
    - CellTypeSet
    - CellTypeTaxon
    - ClusterSet
    - Cluster
    - ColorPalette
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: label type
  description:
    name: description
    definition_uri: https://w3id.org/biolink/vocab/description
    description: a human-readable description of an entity
    in_subset:
    - translator_minimal
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    aliases:
    - definition
    mappings:
    - dct:description
    exact_mappings:
    - IAO:0000115
    - skos:definitions
    narrow_mappings:
    - gff3:Description
    rank: 1000
    slot_uri: dct:description
    alias: description
    owner: ImageDataset
    domain_of:
    - entity
    - CellTypeTaxonomy
    - CellTypeSet
    - CellTypeTaxon
    - ClusterSet
    - ColorPalette
    - attribute
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: narrative text
  has attribute:
    name: has attribute
    definition_uri: https://w3id.org/biolink/vocab/has_attribute
    description: connects any entity to an attribute
    in_subset:
    - samples
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    exact_mappings:
    - SIO:000008
    close_mappings:
    - OBI:0001927
    narrow_mappings:
    - OBAN:association_has_subject_property
    - OBAN:association_has_object_property
    - CPT:has_possibly_included_panel_element
    - DRUGBANK:category
    - EFO:is_executed_in
    - HANCESTRO:0301
    - LOINC:has_action_guidance
    - LOINC:has_adjustment
    - LOINC:has_aggregation_view
    - LOINC:has_approach_guidance
    - LOINC:has_divisor
    - LOINC:has_exam
    - LOINC:has_method
    - LOINC:has_modality_subtype
    - LOINC:has_object_guidance
    - LOINC:has_scale
    - LOINC:has_suffix
    - LOINC:has_time_aspect
    - LOINC:has_time_modifier
    - LOINC:has_timing_of
    - NCIT:R88
    - NCIT:eo_disease_has_property_or_attribute
    - NCIT:has_data_element
    - NCIT:has_pharmaceutical_administration_method
    - NCIT:has_pharmaceutical_basic_dose_form
    - NCIT:has_pharmaceutical_intended_site
    - NCIT:has_pharmaceutical_release_characteristics
    - NCIT:has_pharmaceutical_state_of_matter
    - NCIT:has_pharmaceutical_transformation
    - NCIT:is_qualified_by
    - NCIT:qualifier_applies_to
    - NCIT:role_has_domain
    - NCIT:role_has_range
    - INO:0000154
    - HANCESTRO:0308
    - orphanet:C016
    - orphanet:C017
    - RO:0000053
    - RO:0000086
    - RO:0000087
    - SNOMED:has_access
    - SNOMED:has_clinical_course
    - SNOMED:has_count_of_base_of_active_ingredient
    - SNOMED:has_dose_form_administration_method
    - SNOMED:has_dose_form_release_characteristic
    - SNOMED:has_dose_form_transformation
    - SNOMED:has_finding_context
    - SNOMED:has_finding_informer
    - SNOMED:has_inherent_attribute
    - SNOMED:has_intent
    - SNOMED:has_interpretation
    - SNOMED:has_laterality
    - SNOMED:has_measurement_method
    - SNOMED:has_method
    - SNOMED:has_priority
    - SNOMED:has_procedure_context
    - SNOMED:has_process_duration
    - SNOMED:has_property
    - SNOMED:has_revision_status
    - SNOMED:has_scale_type
    - SNOMED:has_severity
    - SNOMED:has_specimen
    - SNOMED:has_state_of_matter
    - SNOMED:has_subject_relationship_context
    - SNOMED:has_surgical_approach
    - SNOMED:has_technique
    - SNOMED:has_temporal_context
    - SNOMED:has_time_aspect
    - SNOMED:has_units
    - UMLS:has_structural_class
    - UMLS:has_supported_concept_property
    - UMLS:has_supported_concept_relationship
    - UMLS:may_be_qualified_by
    rank: 1000
    domain: entity
    slot_uri: biolink:has_attribute
    alias: has_attribute
    owner: ImageDataset
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: attribute
    multivalued: true
  deprecated:
    name: deprecated
    definition_uri: https://w3id.org/biolink/vocab/deprecated
    description: A boolean flag indicating that an entity is no longer considered
      current or valid.
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    exact_mappings:
    - oboInOwl:ObsoleteClass
    rank: 1000
    slot_uri: biolink:deprecated
    alias: deprecated
    owner: ImageDataset
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: boolean
  provided by:
    name: provided by
    definition_uri: https://w3id.org/biolink/vocab/provided_by
    description: The value in this node property represents the knowledge provider
      that created or assembled the node and all of its attributes.  Used internally
      to represent how a particular node made its way into a knowledge provider or
      graph.
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:provided_by
    alias: provided_by
    owner: ImageDataset
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: string
    multivalued: true
  xref:
    name: xref
    definition_uri: https://w3id.org/biolink/vocab/xref
    description: A database cross reference or alternative identifier for a NamedThing
      or edge between two NamedThings.  This property should point to a database record
      or webpage that supports the existence of the edge, or gives more detail about
      the edge. This property can be used on a node or edge to provide multiple URIs
      or CURIE cross references.
    in_subset:
    - translator_minimal
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    aliases:
    - dbxref
    - Dbxref
    - DbXref
    - record_url
    - source_record_urls
    narrow_mappings:
    - gff3:Dbxref
    - gpi:DB_Xrefs
    rank: 1000
    domain: named thing
    slot_uri: biolink:xref
    alias: xref
    owner: ImageDataset
    domain_of:
    - named thing
    - gene
    - CellTypeTaxonomy
    - CellTypeSet
    - CellTypeTaxon
    - ClusterSet
    - Cluster
    - ObservationMatrix
    - ObservationRow
    - Abbreviation
    - MatrixFile
    - ColorPalette
    - DisplayColor
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - genome
    range: uriorcurie
    multivalued: true
  full name:
    name: full name
    definition_uri: https://w3id.org/biolink/vocab/full_name
    description: a long-form human readable name for a thing
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:full_name
    alias: full_name
    owner: ImageDataset
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: label type
  synonym:
    name: synonym
    definition_uri: https://w3id.org/biolink/vocab/synonym
    description: Alternate human-readable names for a thing
    in_subset:
    - translator_minimal
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    aliases:
    - alias
    narrow_mappings:
    - skos:altLabel
    - gff3:Alias
    - AGRKB:synonyms
    - gpi:DB_Object_Synonyms
    - HANCESTRO:0330
    - IAO:0000136
    - RXNORM:has_tradename
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:synonym
    alias: synonym
    owner: ImageDataset
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: label type
    multivalued: true
  information content:
    name: information content
    definition_uri: https://w3id.org/biolink/vocab/information_content
    description: Information content (IC) value for a term, primarily from Automats.
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:information_content
    alias: information_content
    owner: ImageDataset
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: float
  equivalent identifiers:
    name: equivalent identifiers
    definition_uri: https://w3id.org/biolink/vocab/equivalent_identifiers
    description: A set of identifiers that are considered equivalent to the primary
      identifier of the entity. This attribute is used to represent a collection of
      identifiers that are considered equivalent to the primary identifier of an entity.
      These equivalent identifiers may come from different databases, ontologies,
      or naming conventions, but they all refer to the same underlying concept or
      entity. This attribute is particularly useful in data integration and interoperability
      scenarios, where it is important to recognize and link different representations
      of the same entity across various sources.
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    see_also:
    - biolink:xref
    - biolink:synonyms
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:equivalent_identifiers
    alias: equivalent_identifiers
    owner: ImageDataset
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: uriorcurie
    multivalued: true
  named thing_category:
    name: named thing_category
    definition_uri: https://w3id.org/biolink/vocab/category
    description: Name of the high level ontology class in which this entity is categorized.
      Corresponds to the label for the biolink entity type class. In a neo4j database
      this MAY correspond to the neo4j label tag. In an RDF database it should be
      a biolink model class URI. This field is multi-valued. It should include values
      for ancestors of the biolink class; for example, a protein such as Shh would
      have category values `biolink:Protein`, `biolink:GeneProduct`, `biolink:MolecularEntity`.
      In an RDF database, nodes will typically have an rdf:type triples. This can
      be to the most specific biolink class, or potentially to a class more specific
      than something in biolink. For example, a sequence feature `f` may have a rdf:type
      assertion to a SO class such as TF_binding_site, which is more specific than
      anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity,
      biolink:NamedThing}
    in_subset:
    - translator_minimal
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    rank: 1000
    is_a: category
    domain: named thing
    slot_uri: biolink:category
    designates_type: true
    alias: category
    owner: ImageDataset
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - study result
    - relative frequency analysis result
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    is_class_field: true
    is_usage_slot: true
    usage_slot_name: category
    range: uriorcurie
    required: true
    multivalued: true
  category:
    name: category
    definition_uri: https://w3id.org/biolink/vocab/category
    description: Name of the high level ontology class in which this entity is categorized.
      Corresponds to the label for the biolink entity type class. In a neo4j database
      this MAY correspond to the neo4j label tag. In an RDF database it should be
      a biolink model class URI. This field is multi-valued. It should include values
      for ancestors of the biolink class; for example, a protein such as Shh would
      have category values `biolink:Protein`, `biolink:GeneProduct`, `biolink:MolecularEntity`.
      In an RDF database, nodes will typically have an rdf:type triples. This can
      be to the most specific biolink class, or potentially to a class more specific
      than something in biolink. For example, a sequence feature `f` may have a rdf:type
      assertion to a SO class such as TF_binding_site, which is more specific than
      anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity,
      biolink:NamedThing}
    in_subset:
    - translator_minimal
    from_schema: https://w3id.org/brain-bican/bke-taxonomy
    rank: 1000
    is_a: type
    domain: entity
    slot_uri: biolink:category
    designates_type: true
    alias: category
    owner: ImageDataset
    domain_of:
    - entity
    is_class_field: true
    range: uriorcurie
    required: true
    multivalued: true