Class: GenomicEntity

URI: biolink:GenomicEntity

classDiagram class GenomicEntity click GenomicEntity href "../GenomicEntity" GenomicEntity <|-- Gene click Gene href "../Gene" GenomicEntity <|-- Genome click Genome href "../Genome" GenomicEntity : has_biological_sequence

Slots

Name	Cardinality and Range	Description	Inheritance
has_biological_sequence	0..1 BiologicalSequence	connects a genomic feature to its sequence	direct

Mixin Usage

mixed into	description
Gene	A region (or regions) that includes all of the sequence elements necessary to...
Genome	A genome is the sum of genetic material within a cell or virion

Identifier and Mapping Information

Schema Source

from schema: https://identifiers.org/brain-bican/genome-annotation-schema

Mappings

Mapping Type	Mapped Value
self	biolink:GenomicEntity
native	bican:GenomicEntity
narrow	STY:T028, GENO:0000897

LinkML Source

Direct

name: genomic entity
definition_uri: https://w3id.org/biolink/vocab/GenomicEntity
in_subset:
- translator_minimal
from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
narrow_mappings:
- STY:T028
- GENO:0000897
mixin: true
slots:
- has biological sequence
class_uri: biolink:GenomicEntity

Induced

name: genomic entity
definition_uri: https://w3id.org/biolink/vocab/GenomicEntity
in_subset:
- translator_minimal
from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
narrow_mappings:
- STY:T028
- GENO:0000897
mixin: true
attributes:
  has biological sequence:
    name: has biological sequence
    definition_uri: https://w3id.org/biolink/vocab/has_biological_sequence
    description: connects a genomic feature to its sequence
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:has_biological_sequence
    alias: has_biological_sequence
    owner: genomic entity
    domain_of:
    - genomic entity
    - gene
    - genome
    range: biological sequence
class_uri: biolink:GenomicEntity