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Class: EnrichedCellSample

A collection of enriched cells or nuclei after enrichment process, usually via fluorescence-activated cell sorting (FACS) using the enrichment plan, is applied to dissociated cell sample.

URI: bican:EnrichedCellSample

classDiagram class EnrichedCellSample click EnrichedCellSample href "../EnrichedCellSample" ProvEntity <|-- EnrichedCellSample click ProvEntity href "../ProvEntity" MaterialSample <|-- EnrichedCellSample click MaterialSample href "../MaterialSample" EnrichedCellSample : category EnrichedCellSample : cell_source_oligo_name EnrichedCellSample : deprecated EnrichedCellSample : description EnrichedCellSample : enrichment_population EnrichedCellSample : full_name EnrichedCellSample : has_attribute EnrichedCellSample --> "*" Attribute : has_attribute click Attribute href "../Attribute" EnrichedCellSample : histone_modification_marker EnrichedCellSample : id EnrichedCellSample : iri EnrichedCellSample : name EnrichedCellSample : provided_by EnrichedCellSample : synonym EnrichedCellSample : type EnrichedCellSample : was_derived_from EnrichedCellSample --> "*" ProvEntity : was_derived_from click ProvEntity href "../ProvEntity" EnrichedCellSample : was_generated_by EnrichedCellSample --> "0..1" ProvActivity : was_generated_by click ProvActivity href "../ProvActivity" EnrichedCellSample : xref

Inheritance

Slots

Name Cardinality and Range Description Inheritance
was_generated_by 0..1
ProvActivity or 
CellEnrichment or 
EnrichedCellSampleSplitting		 The cell enrichment or sample splitting process from which the enriched cell ... direct
was_derived_from *
ProvEntity or 
DissociatedCellSample or 
EnrichedCellSample		 The dissociated or enriched cell sample(s) from which the enriched cell sampl... direct
name 0..1
LabelType		 Name of collection of enriched cells or nuclei after enrichment process (usua... direct
enrichment_population 0..1
String		 Actual percentage of cells as a result of using set of fluorescent marker lab... direct
cell_source_oligo_name 0..1
String		 Name of cell source oligo used in cell plexing direct
histone_modification_marker 0..1
String		 Histone modification marker antibodies (eg H3K27ac, H3K27me3, H3K9me3) used i... direct
id 1
String		 A unique identifier for an entity Entity, MaterialSample, NamedThing, PhysicalEntity
iri 0..1
IriType		 An IRI for an entity Entity, MaterialSample, NamedThing, PhysicalEntity
category *
Curie		 Name of the high level ontology class in which this entity is categorized Entity, MaterialSample, NamedThing, PhysicalEntity
type *
String		 Entity, MaterialSample, NamedThing, PhysicalEntity
description 0..1
NarrativeText		 a human-readable description of an entity Entity, MaterialSample, NamedThing, PhysicalEntity
has_attribute *
Attribute		 connects any entity to an attribute Entity, MaterialSample, NamedThing, PhysicalEntity
deprecated 0..1
Boolean		 A boolean flag indicating that an entity is no longer considered current or v... Entity, MaterialSample, NamedThing, PhysicalEntity
provided_by *
String		 The value in this node property represents the knowledge provider that create... MaterialSample, NamedThing, PhysicalEntity
xref *
Uriorcurie		 A database cross reference or alternative identifier for a NamedThing or edge... MaterialSample, NamedThing, PhysicalEntity
full_name 0..1
LabelType		 a long-form human readable name for a thing MaterialSample, NamedThing, PhysicalEntity
synonym *
LabelType		 Alternate human-readable names for a thing MaterialSample, NamedThing, PhysicalEntity

Usages

used by used in type used
EnrichedCellSample was_derived_from exactly_one_of[range] EnrichedCellSample
BarcodedCellSample was_derived_from exactly_one_of[range] EnrichedCellSample
EnrichedCellSampleSplitting used range EnrichedCellSample
CellBarcoding used exactly_one_of[range] EnrichedCellSample

Identifier and Mapping Information

Schema Source

  • from schema: https://identifiers.org/brain-bican/library-generation-schema

Mappings

Mapping Type Mapped Value
self bican:EnrichedCellSample
native bican:EnrichedCellSample
exact NIMP:Enriched%20Cell%20Sample

LinkML Source

Direct

name: EnrichedCellSample
description: A collection of enriched cells or nuclei after enrichment process, usually
  via fluorescence-activated cell sorting (FACS) using the enrichment plan, is applied
  to dissociated cell sample.
in_subset:
- bican
- library_generation
from_schema: https://identifiers.org/brain-bican/library-generation-schema
exact_mappings:
- NIMP:Enriched%20Cell%20Sample
is_a: material sample
mixins:
- ProvEntity
slots:
- was_generated_by
- was_derived_from
- name
slot_usage:
  was_generated_by:
    name: was_generated_by
    description: The cell enrichment or sample splitting process from which the enriched
      cell sample was generated by.
    domain_of:
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryPool
    - DissectionRoiPolygon
    - ProvEntity
    any_of:
    - range: CellEnrichment
    - range: EnrichedCellSampleSplitting
  was_derived_from:
    name: was_derived_from
    description: The dissociated or enriched cell sample(s) from which the enriched
      cell sample was derived from.
    exact_mappings:
    - NIMP:has_parent
    domain_of:
    - BrainSlab
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryAliquot
    - LibraryPool
    - DigitalAsset
    - ProvEntity
    multivalued: true
    exactly_one_of:
    - range: DissociatedCellSample
    - range: EnrichedCellSample
  name:
    name: name
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enriched_cell_sample_local_name
    description: Name of collection of enriched cells or nuclei after enrichment process
      (usually via FACS using the Enrichment Plan) applied to dissociated_cell_sample.
    exact_mappings:
    - NIMP:PD-BERWTM41
    slot_uri: bican:bb3fc701-23a7-45c1-890d-7471730e0ec1
    domain_of:
    - Donor
    - BrainSlab
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryAliquot
    - LibraryPool
    - DissectionRoiPolygon
    - entity
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - macromolecular machine mixin
    - gene or gene product
    - gene
    - genome
attributes:
  enrichment_population:
    name: enrichment_population
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enrichment_population
    description: Actual percentage of cells as a result of using set of fluorescent
      marker label(s) to enrich dissociated_cell_sample with desired mix of cell populations.  This
      plan can also be used to describe 'No FACS' where no enrichment was performed.  This
      is a property of enriched_cell_prep_container.
    in_subset:
    - analysis
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-TZTZPI37
    rank: 1000
    slot_uri: bican:875f1c70-f5aa-45e3-94b9-5e482f6c4830
    alias: enrichment population
    domain_of:
    - EnrichedCellSample
    range: string
  cell_source_oligo_name:
    name: cell_source_oligo_name
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enriched_cell_sample_cell_label_barcode
    description: Name of cell source oligo used in cell plexing.  The oligo molecularly
      tags all the cells in the enriched cell sample and allows separate enriched
      cell samples to be combined downstream in the barcoded cell sample.  The oligo
      name is associated with a sequence in a lookup table.  This sequence will be
      needed during alignment to associate reads with the parent source enriched cell
      sample.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-CFCFPS27
    domain_of:
    - DissociatedCellSample
    - EnrichedCellSample
  histone_modification_marker:
    name: histone_modification_marker
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: histone_modification_marker
    description: Histone modification marker antibodies (eg H3K27ac, H3K27me3, H3K9me3)
      used in conjunction with an Enriched Cell Source Barcode in order to combine
      multiple Enriched Cell Populations before Barcoded Cell Sample step for 10xMultiome
      method. Each of the Histone antibodies captures an essential part of the epigenome.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-ESESLW44
    rank: 1000
    domain_of:
    - EnrichedCellSample

Induced

name: EnrichedCellSample
description: A collection of enriched cells or nuclei after enrichment process, usually
  via fluorescence-activated cell sorting (FACS) using the enrichment plan, is applied
  to dissociated cell sample.
in_subset:
- bican
- library_generation
from_schema: https://identifiers.org/brain-bican/library-generation-schema
exact_mappings:
- NIMP:Enriched%20Cell%20Sample
is_a: material sample
mixins:
- ProvEntity
slot_usage:
  was_generated_by:
    name: was_generated_by
    description: The cell enrichment or sample splitting process from which the enriched
      cell sample was generated by.
    domain_of:
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryPool
    - DissectionRoiPolygon
    - ProvEntity
    any_of:
    - range: CellEnrichment
    - range: EnrichedCellSampleSplitting
  was_derived_from:
    name: was_derived_from
    description: The dissociated or enriched cell sample(s) from which the enriched
      cell sample was derived from.
    exact_mappings:
    - NIMP:has_parent
    domain_of:
    - BrainSlab
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryAliquot
    - LibraryPool
    - DigitalAsset
    - ProvEntity
    multivalued: true
    exactly_one_of:
    - range: DissociatedCellSample
    - range: EnrichedCellSample
  name:
    name: name
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enriched_cell_sample_local_name
    description: Name of collection of enriched cells or nuclei after enrichment process
      (usually via FACS using the Enrichment Plan) applied to dissociated_cell_sample.
    exact_mappings:
    - NIMP:PD-BERWTM41
    slot_uri: bican:bb3fc701-23a7-45c1-890d-7471730e0ec1
    domain_of:
    - Donor
    - BrainSlab
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryAliquot
    - LibraryPool
    - DissectionRoiPolygon
    - entity
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - macromolecular machine mixin
    - gene or gene product
    - gene
    - genome
attributes:
  enrichment_population:
    name: enrichment_population
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enrichment_population
    description: Actual percentage of cells as a result of using set of fluorescent
      marker label(s) to enrich dissociated_cell_sample with desired mix of cell populations.  This
      plan can also be used to describe 'No FACS' where no enrichment was performed.  This
      is a property of enriched_cell_prep_container.
    in_subset:
    - analysis
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-TZTZPI37
    rank: 1000
    slot_uri: bican:875f1c70-f5aa-45e3-94b9-5e482f6c4830
    alias: enrichment population
    owner: EnrichedCellSample
    domain_of:
    - EnrichedCellSample
    range: string
  cell_source_oligo_name:
    name: cell_source_oligo_name
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enriched_cell_sample_cell_label_barcode
    description: Name of cell source oligo used in cell plexing.  The oligo molecularly
      tags all the cells in the enriched cell sample and allows separate enriched
      cell samples to be combined downstream in the barcoded cell sample.  The oligo
      name is associated with a sequence in a lookup table.  This sequence will be
      needed during alignment to associate reads with the parent source enriched cell
      sample.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-CFCFPS27
    alias: cell_source_oligo_name
    owner: EnrichedCellSample
    domain_of:
    - DissociatedCellSample
    - EnrichedCellSample
    range: string
  histone_modification_marker:
    name: histone_modification_marker
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: histone_modification_marker
    description: Histone modification marker antibodies (eg H3K27ac, H3K27me3, H3K9me3)
      used in conjunction with an Enriched Cell Source Barcode in order to combine
      multiple Enriched Cell Populations before Barcoded Cell Sample step for 10xMultiome
      method. Each of the Histone antibodies captures an essential part of the epigenome.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-ESESLW44
    rank: 1000
    alias: histone_modification_marker
    owner: EnrichedCellSample
    domain_of:
    - EnrichedCellSample
    range: string
  was_generated_by:
    name: was_generated_by
    description: The cell enrichment or sample splitting process from which the enriched
      cell sample was generated by.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    rank: 1000
    slot_uri: prov:wasGeneratedBy
    alias: was_generated_by
    owner: EnrichedCellSample
    domain_of:
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryPool
    - DissectionRoiPolygon
    - ProvEntity
    range: ProvActivity
    any_of:
    - range: CellEnrichment
    - range: EnrichedCellSampleSplitting
  was_derived_from:
    name: was_derived_from
    description: The dissociated or enriched cell sample(s) from which the enriched
      cell sample was derived from.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:has_parent
    rank: 1000
    slot_uri: prov:wasDerivedFrom
    alias: was_derived_from
    owner: EnrichedCellSample
    domain_of:
    - BrainSlab
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryAliquot
    - LibraryPool
    - DigitalAsset
    - ProvEntity
    range: ProvEntity
    multivalued: true
    exactly_one_of:
    - range: DissociatedCellSample
    - range: EnrichedCellSample
  name:
    name: name
    definition_uri: https://w3id.org/biolink/vocab/name
    local_names:
      NIMP:
        local_name_source: NIMP
        local_name_value: enriched_cell_sample_local_name
    description: Name of collection of enriched cells or nuclei after enrichment process
      (usually via FACS using the Enrichment Plan) applied to dissociated_cell_sample.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - NIMP:PD-BERWTM41
    rank: 1000
    domain: entity
    slot_uri: bican:bb3fc701-23a7-45c1-890d-7471730e0ec1
    alias: name
    owner: EnrichedCellSample
    domain_of:
    - Donor
    - BrainSlab
    - TissueSample
    - DissociatedCellSample
    - EnrichedCellSample
    - BarcodedCellSample
    - AmplifiedCdna
    - Library
    - LibraryAliquot
    - LibraryPool
    - DissectionRoiPolygon
    - entity
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - macromolecular machine mixin
    - gene or gene product
    - gene
    - genome
    range: label type
  id:
    name: id
    definition_uri: https://w3id.org/biolink/vocab/id
    description: A unique identifier for an entity. Must be either a CURIE shorthand
      for a URI or a complete URI
    in_subset:
    - translator_minimal
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - AGRKB:primaryId
    - gff3:ID
    - gpi:DB_Object_ID
    rank: 1000
    domain: entity
    slot_uri: biolink:id
    identifier: true
    alias: id
    owner: EnrichedCellSample
    domain_of:
    - ontology class
    - entity
    - attribute
    - named thing
    - taxonomic rank
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: string
    required: true
  iri:
    name: iri
    definition_uri: https://w3id.org/biolink/vocab/iri
    description: An IRI for an entity. This is determined by the id using expansion
      rules.
    in_subset:
    - translator_minimal
    - samples
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - WIKIDATA_PROPERTY:P854
    rank: 1000
    slot_uri: biolink:iri
    alias: iri
    owner: EnrichedCellSample
    domain_of:
    - attribute
    - entity
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: iri type
  category:
    name: category
    definition_uri: https://w3id.org/biolink/vocab/category
    description: 'Name of the high level ontology class in which this entity is categorized.
      Corresponds to the label for the biolink entity type class. In a neo4j database
      this MAY correspond to the neo4j label tag. In an RDF database it should be
      a biolink model class URI. This field is multi-valued. It should include values
      for ancestors of the biolink class; for example, a protein such as Shh would
      have category values `biolink:Protein`, `biolink:GeneProduct`, `biolink:MolecularEntity`.
      In an RDF database, nodes will typically have an rdf:type triples. This can
      be to the most specific biolink class, or potentially to a class more specific
      than something in biolink. For example, a sequence feature `f` may have a rdf:type
      assertion to a SO class such as TF_binding_site, which is more specific than
      anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity,
      biolink:NamedThing}. NOTE: The category slot was modified to have a curie range
      and a pattern for bican categories.'
    in_subset:
    - translator_minimal
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    rank: 1000
    is_a: type
    domain: entity
    slot_uri: biolink:category
    designates_type: true
    alias: category
    owner: EnrichedCellSample
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    is_class_field: true
    range: curie
    multivalued: true
    pattern: ^bican:[A-Z][A-Za-z]+$
  type:
    name: type
    definition_uri: https://w3id.org/biolink/vocab/type
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    mappings:
    - rdf:type
    exact_mappings:
    - gff3:type
    - gpi:DB_Object_Type
    rank: 1000
    domain: entity
    slot_uri: rdf:type
    alias: type
    owner: EnrichedCellSample
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: string
    multivalued: true
  description:
    name: description
    definition_uri: https://w3id.org/biolink/vocab/description
    description: a human-readable description of an entity
    in_subset:
    - translator_minimal
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    aliases:
    - definition
    mappings:
    - dct:description
    exact_mappings:
    - IAO:0000115
    - skos:definitions
    narrow_mappings:
    - gff3:Description
    rank: 1000
    slot_uri: dct:description
    alias: description
    owner: EnrichedCellSample
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: narrative text
  has attribute:
    name: has attribute
    definition_uri: https://w3id.org/biolink/vocab/has_attribute
    description: connects any entity to an attribute
    in_subset:
    - samples
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - SIO:000008
    close_mappings:
    - OBI:0001927
    narrow_mappings:
    - OBAN:association_has_subject_property
    - OBAN:association_has_object_property
    - CPT:has_possibly_included_panel_element
    - DRUGBANK:category
    - EFO:is_executed_in
    - HANCESTRO:0301
    - LOINC:has_action_guidance
    - LOINC:has_adjustment
    - LOINC:has_aggregation_view
    - LOINC:has_approach_guidance
    - LOINC:has_divisor
    - LOINC:has_exam
    - LOINC:has_method
    - LOINC:has_modality_subtype
    - LOINC:has_object_guidance
    - LOINC:has_scale
    - LOINC:has_suffix
    - LOINC:has_time_aspect
    - LOINC:has_time_modifier
    - LOINC:has_timing_of
    - NCIT:R88
    - NCIT:eo_disease_has_property_or_attribute
    - NCIT:has_data_element
    - NCIT:has_pharmaceutical_administration_method
    - NCIT:has_pharmaceutical_basic_dose_form
    - NCIT:has_pharmaceutical_intended_site
    - NCIT:has_pharmaceutical_release_characteristics
    - NCIT:has_pharmaceutical_state_of_matter
    - NCIT:has_pharmaceutical_transformation
    - NCIT:is_qualified_by
    - NCIT:qualifier_applies_to
    - NCIT:role_has_domain
    - NCIT:role_has_range
    - INO:0000154
    - HANCESTRO:0308
    - OMIM:has_inheritance_type
    - orphanet:C016
    - orphanet:C017
    - RO:0000053
    - RO:0000086
    - RO:0000087
    - SNOMED:has_access
    - SNOMED:has_clinical_course
    - SNOMED:has_count_of_base_of_active_ingredient
    - SNOMED:has_dose_form_administration_method
    - SNOMED:has_dose_form_release_characteristic
    - SNOMED:has_dose_form_transformation
    - SNOMED:has_finding_context
    - SNOMED:has_finding_informer
    - SNOMED:has_inherent_attribute
    - SNOMED:has_intent
    - SNOMED:has_interpretation
    - SNOMED:has_laterality
    - SNOMED:has_measurement_method
    - SNOMED:has_method
    - SNOMED:has_priority
    - SNOMED:has_procedure_context
    - SNOMED:has_process_duration
    - SNOMED:has_property
    - SNOMED:has_revision_status
    - SNOMED:has_scale_type
    - SNOMED:has_severity
    - SNOMED:has_specimen
    - SNOMED:has_state_of_matter
    - SNOMED:has_subject_relationship_context
    - SNOMED:has_surgical_approach
    - SNOMED:has_technique
    - SNOMED:has_temporal_context
    - SNOMED:has_time_aspect
    - SNOMED:has_units
    - UMLS:has_structural_class
    - UMLS:has_supported_concept_property
    - UMLS:has_supported_concept_relationship
    - UMLS:may_be_qualified_by
    rank: 1000
    domain: entity
    slot_uri: biolink:has_attribute
    alias: has_attribute
    owner: EnrichedCellSample
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: attribute
    multivalued: true
  deprecated:
    name: deprecated
    definition_uri: https://w3id.org/biolink/vocab/deprecated
    description: A boolean flag indicating that an entity is no longer considered
      current or valid.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    exact_mappings:
    - oboInOwl:ObsoleteClass
    rank: 1000
    slot_uri: biolink:deprecated
    alias: deprecated
    owner: EnrichedCellSample
    domain_of:
    - entity
    - attribute
    - named thing
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: boolean
  provided by:
    name: provided by
    definition_uri: https://w3id.org/biolink/vocab/provided_by
    description: The value in this node property represents the knowledge provider
      that created or assembled the node and all of its attributes.  Used internally
      to represent how a particular node made its way into a knowledge provider or
      graph.
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:provided_by
    alias: provided_by
    owner: EnrichedCellSample
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: string
    multivalued: true
  xref:
    name: xref
    definition_uri: https://w3id.org/biolink/vocab/xref
    description: A database cross reference or alternative identifier for a NamedThing
      or edge between two NamedThings.  This property should point to a database record
      or webpage that supports the existence of the edge, or gives more detail about
      the edge. This property can be used on a node or edge to provide multiple URIs
      or CURIE cross references.
    in_subset:
    - translator_minimal
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    aliases:
    - dbxref
    - Dbxref
    - DbXref
    - record_url
    - source_record_urls
    narrow_mappings:
    - gff3:Dbxref
    - gpi:DB_Xrefs
    rank: 1000
    domain: named thing
    slot_uri: biolink:xref
    alias: xref
    owner: EnrichedCellSample
    domain_of:
    - named thing
    - gene
    - attribute
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - genome
    range: uriorcurie
    multivalued: true
  full name:
    name: full name
    definition_uri: https://w3id.org/biolink/vocab/full_name
    description: a long-form human readable name for a thing
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:full_name
    alias: full_name
    owner: EnrichedCellSample
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: label type
  synonym:
    name: synonym
    definition_uri: https://w3id.org/biolink/vocab/synonym
    description: Alternate human-readable names for a thing
    in_subset:
    - translator_minimal
    from_schema: https://identifiers.org/brain-bican/library-generation-schema
    aliases:
    - alias
    narrow_mappings:
    - skos:altLabel
    - gff3:Alias
    - AGRKB:synonyms
    - gpi:DB_Object_Synonyms
    - HANCESTRO:0330
    - IAO:0000136
    - RXNORM:has_tradename
    rank: 1000
    is_a: node property
    domain: named thing
    slot_uri: biolink:synonym
    alias: synonym
    owner: EnrichedCellSample
    domain_of:
    - named thing
    - attribute
    - organism taxon
    - information content entity
    - dataset
    - physical entity
    - activity
    - procedure
    - material sample
    - biological entity
    - gene
    - genome
    range: label type
    multivalued: true