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Class: AnnotationCollection

URI: bican:AnnotationCollection

classDiagram class AnnotationCollection click AnnotationCollection href "../AnnotationCollection" AnnotationCollection : annotations AnnotationCollection --> "*" GeneAnnotation : annotations click GeneAnnotation href "../GeneAnnotation" AnnotationCollection : genome_annotations AnnotationCollection --> "*" GenomeAnnotation : genome_annotations click GenomeAnnotation href "../GenomeAnnotation" AnnotationCollection : genome_assemblies AnnotationCollection --> "*" GenomeAssembly : genome_assemblies click GenomeAssembly href "../GenomeAssembly"

Slots

Name Cardinality and Range Description Inheritance
annotations *
GeneAnnotation		 direct
genome_annotations *
GenomeAnnotation		 direct
genome_assemblies *
GenomeAssembly		 direct

Identifier and Mapping Information

Schema Source

  • from schema: https://identifiers.org/brain-bican/genome-annotation-schema

Mappings

Mapping Type Mapped Value
self bican:AnnotationCollection
native bican:AnnotationCollection

LinkML Source

Direct

name: annotation collection
from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
attributes:
  annotations:
    name: annotations
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    multivalued: true
    domain_of:
    - annotation collection
    range: gene annotation
    inlined: true
    inlined_as_list: true
  genome_annotations:
    name: genome_annotations
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    multivalued: true
    domain_of:
    - annotation collection
    range: genome annotation
    inlined: true
    inlined_as_list: true
  genome_assemblies:
    name: genome_assemblies
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    multivalued: true
    domain_of:
    - annotation collection
    range: genome assembly
    inlined: true
    inlined_as_list: true
tree_root: true

Induced

name: annotation collection
from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
attributes:
  annotations:
    name: annotations
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    multivalued: true
    alias: annotations
    owner: annotation collection
    domain_of:
    - annotation collection
    range: gene annotation
    inlined: true
    inlined_as_list: true
  genome_annotations:
    name: genome_annotations
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    multivalued: true
    alias: genome_annotations
    owner: annotation collection
    domain_of:
    - annotation collection
    range: genome annotation
    inlined: true
    inlined_as_list: true
  genome_assemblies:
    name: genome_assemblies
    from_schema: https://identifiers.org/brain-bican/genome-annotation-schema
    rank: 1000
    multivalued: true
    alias: genome_assemblies
    owner: annotation collection
    domain_of:
    - annotation collection
    range: genome assembly
    inlined: true
    inlined_as_list: true
tree_root: true