CS202210140_315
Misc_314 (CS202210140_315)
Hierarchy: CS202210140_463 > CS202210140_315
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_315
Labelset: Cluster (Rank: 1)
Parent Cell Set: Miscellaneous (CS202210140_463)
Cell Ontology Term: Purkinje cell (CL:0000121)
Rationale: Kozareva, V., Martin, C., Osorno, T. et al. A transcriptomic atlas of mouse cerebellar cortex comprehensively defines cell types. Nature 598, 214–219 (2021).
| Rationale DOIs |
|---|
| https://doi.org/10.1038/s41586-021-03220-z |
| Marker Genes |
|---|
| PCP2 |
| SKOR2 |
| PVALB |
| GAD2 |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 314 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | GABA |
| Neuropeptide auto_annotation | ADCYAP CHGB IGF KISS NAMPT NPPC NUCB TAC UBL proSAAS |
| Subtype auto_annotation | CB-PURK |
| Transferred MTG Label | None |
| Top three regions | Medulla: 35.7%, Pons: 33.3%, Cerebellum: 26.2% |
| Top three dissections | Human CBV: 23.8%, Human PnAN: 21.4%, Human MoAN: 16.7% |
| Top Enriched Genes | PCP2, TRABD2B, ZNF385C, AL109659.1, ATP2A3, LINC02794, IL20RA, NCAM1-AS1, AC092448.1, GNG13 |
| Number of cells | 42.0 |
| DoubletFinder score | 0.080983627 |
| Total UMI | 38316.85714 |
| Fraction unspliced | 0.691359334 |
| Fraction mitochondrial | 0.003015874 |
| H19.30.002 | 9.0 |
| H19.30.001 | 29.0 |
| H18.30.002 | 4.0 |
| H18.30.001 | 0.0 |
| Fraction cells from top donor | 0.69047619 |
| Number of donors | 3.0 |
| subcluster_id | None |