CS202210140_282
CGE_281 (CS202210140_282)
Hierarchy: CS202210140_486 > CS202210140_282
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_282
Labelset: Cluster (Rank: 1)
Parent Cell Set: CGE interneuron (CS202210140_486)
Cell Ontology Term: vip GABAergic cortical interneuron (CL:4023016)
| Rationale DOIs |
|---|
| https://doi.org/10.1038/s41586-020-2781-z |
| Marker Genes |
|---|
| FOXG1 |
| NR2F1 |
| DLX1 |
| ADARB2 |
| CXCL14 |
| GAD2 |
| VIP |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 281 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | GABA |
| Neuropeptide auto_annotation | CCK CHGA CHGB CRH IGF NAMPT NUCB PNOC SCG UBL VIP proSAAS |
| Subtype auto_annotation | INT-VIP |
| Transferred MTG Label | None |
| Top three regions | Cerebral cortex: 70.5%, Amygdala: 13.0%, Hippocampus: 10.6% |
| Top three dissections | Human Pir: 5.7%, Human MEC: 4.6%, Human M1C: 4.5% |
| Top Enriched Genes | HTR3A, AC004862.1, AL139090.1, HGFAC, AL391832.4, CHRNA6, EDNRA, AC006305.1, CHRNB3, TNFAIP8L3 |
| Number of cells | 2234.0 |
| DoubletFinder score | 0.055126322 |
| Total UMI | 21801.3581 |
| Fraction unspliced | 0.702684747 |
| Fraction mitochondrial | 0.010584575 |
| H19.30.002 | 678.0 |
| H19.30.001 | 749.0 |
| H18.30.002 | 774.0 |
| H18.30.001 | 33.0 |
| Fraction cells from top donor | 0.346463742 |
| Number of donors | 4.0 |
| subcluster_id | None |