CS202210140_281
CGE_280 (CS202210140_281)
Hierarchy: CS202210140_486 > CS202210140_281
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_281
Labelset: Cluster (Rank: 1)
Parent Cell Set: CGE interneuron (CS202210140_486)
Cell Ontology Term: vip GABAergic cortical interneuron (CL:4023016)
| Rationale DOIs |
|---|
| https://doi.org/10.1038/s41586-020-2781-z |
| Marker Genes |
|---|
| FOXG1 |
| NR2F1 |
| DLX1 |
| ADARB2 |
| CXCL14 |
| GAD2 |
| VIP |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 280 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | GABA |
| Neuropeptide auto_annotation | CCK CHGA CHGB CRH IGF NAMPT NUCB PNOC SCG UBL VIP proSAAS |
| Subtype auto_annotation | INT-VIP |
| Transferred MTG Label | None |
| Top three regions | Cerebral cortex: 73.7%, Amygdala: 13.3%, Hippocampus: 7.8% |
| Top three dissections | Human MEC: 7.2%, Human Pir: 6.0%, Human LEC: 5.6% |
| Top Enriched Genes | AC006305.1, LINC01416, AL391832.4, LINC01905, SP8, DCN, CHRNB3, CXCL14, CHRNA7, CRH |
| Number of cells | 5106.0 |
| DoubletFinder score | 0.028911344 |
| Total UMI | 15170.43596 |
| Fraction unspliced | 0.673662021 |
| Fraction mitochondrial | 0.009611395 |
| H19.30.002 | 1563.0 |
| H19.30.001 | 1818.0 |
| H18.30.002 | 1695.0 |
| H18.30.001 | 30.0 |
| Fraction cells from top donor | 0.356051704 |
| Number of donors | 4.0 |
| subcluster_id | None |