CS202210140_280
CGE_279 (CS202210140_280)
Hierarchy: CS202210140_486 > CS202210140_280
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_280
Labelset: Cluster (Rank: 1)
Parent Cell Set: CGE interneuron (CS202210140_486)
Cell Ontology Term: vip GABAergic cortical interneuron (CL:4023016)
| Rationale DOIs |
|---|
| https://doi.org/10.1038/s41586-020-2781-z |
| Marker Genes |
|---|
| FOXG1 |
| NR2F1 |
| DLX1 |
| ADARB2 |
| CXCL14 |
| GAD2 |
| VIP |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 279 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | GABA VGLUT3 |
| Neuropeptide auto_annotation | CCK CHGA CHGB CRH IGF NAMPT NUCB NXPH SCG UBL VIP proSAAS |
| Subtype auto_annotation | INT-VIP |
| Transferred MTG Label | None |
| Top three regions | Cerebral cortex: 54.6%, Hippocampus: 26.0%, Amygdala: 14.6% |
| Top three dissections | Human MEC: 5.4%, Human CMN: 5.0%, Human CA4C-DGC: 5.0% |
| Top Enriched Genes | LINC01162, AC006305.1, HTR3A, HGFAC, SP8, CXCL14, SLC17A8, CNR1, LINC01470, LINC01416 |
| Number of cells | 7444.0 |
| DoubletFinder score | 0.046844603 |
| Total UMI | 25857.80508 |
| Fraction unspliced | 0.688733242 |
| Fraction mitochondrial | 0.011100656 |
| H19.30.002 | 2603.0 |
| H19.30.001 | 2108.0 |
| H18.30.002 | 2644.0 |
| H18.30.001 | 89.0 |
| Fraction cells from top donor | 0.355185384 |
| Number of donors | 4.0 |
| subcluster_id | None |