CS202210140_277
CGE_276 (CS202210140_277)
Hierarchy: CS202210140_486 > CS202210140_277
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_277
Labelset: Cluster (Rank: 1)
Parent Cell Set: CGE interneuron (CS202210140_486)
Cell Ontology Term: vip GABAergic cortical interneuron (CL:4023016)
| Rationale DOIs |
|---|
| https://doi.org/10.1038/s41586-020-2781-z |
| Marker Genes |
|---|
| FOXG1 |
| NR2F1 |
| DLX1 |
| ADARB2 |
| CXCL14 |
| GAD2 |
| VIP |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 276 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | GABA VGLUT3 |
| Neuropeptide auto_annotation | CCK CHGA CHGB GRP IGF NAMPT NPY NUCB NXPH PNOC SCG SST UBL VGF VIP proSAAS |
| Subtype auto_annotation | INT-VIP |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 73.7%, Amygdala: 13.0%, Cerebral cortex: 10.8% |
| Top three dissections | Human CA3R: 12.6%, Human CA4C-DGC: 12.2%, Human CA1U-CA2U-CA3U: 11.2% |
| Top Enriched Genes | SHISAL2B, HTR3A, SLC17A8, LINC01997, GAS2L3, SCGN, AC112178.1, GPC3, PTGFR, ACADL |
| Number of cells | 2080.0 |
| DoubletFinder score | 0.073606689 |
| Total UMI | 29291.94952 |
| Fraction unspliced | 0.685450561 |
| Fraction mitochondrial | 0.007860523 |
| H19.30.002 | 626.0 |
| H19.30.001 | 489.0 |
| H18.30.002 | 955.0 |
| H18.30.001 | 10.0 |
| Fraction cells from top donor | 0.459134615 |
| Number of donors | 4.0 |
| subcluster_id | None |