CS202210140_206
DG_205 (CS202210140_206)
Hierarchy: CS202210140_480 > CS202210140_206
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_206
Labelset: Cluster (Rank: 1)
Parent Cell Set: Hippocampal dentate gyrus (CS202210140_480)
Cell Ontology Term: dentate gyrus granule cell (CL:2000089)
Rationale: mousebrain.org - added ZBTB20, DPF3, CEBPD based on human data
| Marker Genes |
|---|
| SLC17A7 |
| PROX1 |
| NR3C2 |
| TUBGCP2 |
| ZBTB20 |
| DPF3 |
| CEBPD |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 205 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | VGLUT1 |
| Neuropeptide auto_annotation | CBLN CCK CHGB GRP NAMPT NUCB SCG UBL proSAAS |
| Subtype auto_annotation | DG-GRAN |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 96.5%, Midbrain: 3.4%, Thalamus: 0.0% |
| Top three dissections | Human DGU-CA4Upy: 74.0%, Human CA1U-CA2U-CA3U: 17.4%, Human SN: 3.4% |
| Top Enriched Genes | AC097528.1, AC097487.1, LINC01697, AJ006995.1, AC079772.1, LINC02237, LINC02030, GRP, AC021088.1, LINC01324 |
| Number of cells | 5813.0 |
| DoubletFinder score | 0.026180391 |
| Total UMI | 15045.19405 |
| Fraction unspliced | 0.701811312 |
| Fraction mitochondrial | 0.002537251 |
| H19.30.002 | 1259.0 |
| H19.30.001 | 4316.0 |
| H18.30.002 | 238.0 |
| H18.30.001 | 0.0 |
| Fraction cells from top donor | 0.742473766 |
| Number of donors | 3.0 |
| subcluster_id | None |