CS202210140_205
DG_204 (CS202210140_205)
Hierarchy: CS202210140_480 > CS202210140_205
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_205
Labelset: Cluster (Rank: 1)
Parent Cell Set: Hippocampal dentate gyrus (CS202210140_480)
Cell Ontology Term: dentate gyrus granule cell (CL:2000089)
Rationale: mousebrain.org - added ZBTB20, DPF3, CEBPD based on human data
| Marker Genes |
|---|
| SLC17A7 |
| PROX1 |
| NR3C2 |
| TUBGCP2 |
| ZBTB20 |
| DPF3 |
| CEBPD |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 204 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | VGLUT1 |
| Neuropeptide auto_annotation | CBLN CCK CHGB GRP NAMPT NUCB SCG UBL proSAAS |
| Subtype auto_annotation | DG-GRAN |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 98.3%, Thalamus: 1.7%, Cerebral cortex: 0.0% |
| Top three dissections | Human DGR-CA4Rpy: 39.0%, Human CA1R-CA2R-CA3R: 32.3%, Human CA4C-DGC: 22.8% |
| Top Enriched Genes | TTR, LINC02030, LINC01697, LINC02237, AJ006995.1, CHRNA1, AC097487.1, AC097528.1, AC021088.1, CASC6 |
| Number of cells | 9290.0 |
| DoubletFinder score | 0.025296283 |
| Total UMI | 12000.08644 |
| Fraction unspliced | 0.653818008 |
| Fraction mitochondrial | 0.006352856 |
| H19.30.002 | 2325.0 |
| H19.30.001 | 6715.0 |
| H18.30.002 | 250.0 |
| H18.30.001 | 0.0 |
| Fraction cells from top donor | 0.722820237 |
| Number of donors | 3.0 |
| subcluster_id | None |