CS202210140_204
DG_203 (CS202210140_204)
Hierarchy: CS202210140_480 > CS202210140_204
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_204
Labelset: Cluster (Rank: 1)
Parent Cell Set: Hippocampal dentate gyrus (CS202210140_480)
Cell Ontology Term: dentate gyrus granule cell (CL:2000089)
Rationale: mousebrain.org - added ZBTB20, DPF3, CEBPD based on human data
| Marker Genes |
|---|
| SLC17A7 |
| PROX1 |
| NR3C2 |
| TUBGCP2 |
| ZBTB20 |
| DPF3 |
| CEBPD |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 203 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | VGLUT1 |
| Neuropeptide auto_annotation | CBLN CCK CHGB GRP NAMPT NUCB SCG UBL proSAAS |
| Subtype auto_annotation | DG-GRAN |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 98.3%, Midbrain: 1.4%, Cerebral cortex: 0.2% |
| Top three dissections | Human DGU-CA4Upy: 42.8%, Human DGR-CA4: 13.9%, Human DGR-CA4Rpy: 13.6% |
| Top Enriched Genes | AC097528.1, LINC02248, AC097487.1, AC092110.1, AC079772.1, AC009878.2, COL6A3, AL445985.1, GRP, AL161629.1 |
| Number of cells | 8378.0 |
| DoubletFinder score | 0.02998415 |
| Total UMI | 22338.40308 |
| Fraction unspliced | 0.750678884 |
| Fraction mitochondrial | 0.003157119 |
| H19.30.002 | 4364.0 |
| H19.30.001 | 2424.0 |
| H18.30.002 | 1576.0 |
| H18.30.001 | 14.0 |
| Fraction cells from top donor | 0.52088804 |
| Number of donors | 4.0 |
| subcluster_id | None |