CS202210140_202
DG_201 (CS202210140_202)
Hierarchy: CS202210140_480 > CS202210140_202
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_202
Labelset: Cluster (Rank: 1)
Parent Cell Set: Hippocampal dentate gyrus (CS202210140_480)
Cell Ontology Term: dentate gyrus granule cell (CL:2000089)
Rationale: mousebrain.org - added ZBTB20, DPF3, CEBPD based on human data
| Marker Genes |
|---|
| SLC17A7 |
| PROX1 |
| NR3C2 |
| TUBGCP2 |
| ZBTB20 |
| DPF3 |
| CEBPD |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 201 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | VGLUT1 |
| Neuropeptide auto_annotation | CBLN CHGB GRP IGF NAMPT NUCB PDYN UBL proSAAS |
| Subtype auto_annotation | DG-GRAN |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 99.9%, Midbrain: 0.1%, Thalamus: 0.0% |
| Top three dissections | Human DGU-CA4Upy: 34.3%, Human DGR-CA4: 34.3%, Human DGR-CA4Rpy: 14.6% |
| Top Enriched Genes | AC097487.1, AC097528.1, COL6A3, NTF3, LINC01697, ANKRD20A19P, AL672167.1, LINC01324, AC092110.1, AL445985.1 |
| Number of cells | 18996.0 |
| DoubletFinder score | 0.036672984 |
| Total UMI | 25758.20167 |
| Fraction unspliced | 0.787421676 |
| Fraction mitochondrial | 0.004879864 |
| H19.30.002 | 8730.0 |
| H19.30.001 | 1582.0 |
| H18.30.002 | 8684.0 |
| H18.30.001 | 0.0 |
| Fraction cells from top donor | 0.459570436 |
| Number of donors | 3.0 |
| subcluster_id | None |