CS202210140_201
DG_200 (CS202210140_201)
Hierarchy: CS202210140_480 > CS202210140_201
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_201
Labelset: Cluster (Rank: 1)
Parent Cell Set: Hippocampal dentate gyrus (CS202210140_480)
Cell Ontology Term: dentate gyrus granule cell (CL:2000089)
Rationale: mousebrain.org - added ZBTB20, DPF3, CEBPD based on human data
| Marker Genes |
|---|
| SLC17A7 |
| PROX1 |
| NR3C2 |
| TUBGCP2 |
| ZBTB20 |
| DPF3 |
| CEBPD |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 200 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | VGLUT1 |
| Neuropeptide auto_annotation | CBLN CHGB GRP NAMPT NUCB PDYN proSAAS |
| Subtype auto_annotation | DG-GRAN |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 99.4%, Thalamus: 0.5%, Midbrain: 0.1% |
| Top three dissections | Human CA4C-DGC: 59.1%, Human DGR-CA4Rpy: 18.1%, Human DGU-CA4Upy: 11.3% |
| Top Enriched Genes | LINC01697, AC097487.1, AJ006995.1, CHRNA1, TARID, AC097528.1, AC079793.1, NTF3, MCOLN3, COL6A3 |
| Number of cells | 23293.0 |
| DoubletFinder score | 0.033016139 |
| Total UMI | 17663.11287 |
| Fraction unspliced | 0.759617511 |
| Fraction mitochondrial | 0.003639626 |
| H19.30.002 | 8807.0 |
| H19.30.001 | 6908.0 |
| H18.30.002 | 7574.0 |
| H18.30.001 | 4.0 |
| Fraction cells from top donor | 0.378096424 |
| Number of donors | 4.0 |
| subcluster_id | None |