CS202210140_200
DG_199 (CS202210140_200)
Hierarchy: CS202210140_480 > CS202210140_200
PURL: https://purl.brain-bican.org/taxonomy/CS202210140/CS202210140_neurons/CS202210140_200
Labelset: Cluster (Rank: 1)
Parent Cell Set: Hippocampal dentate gyrus (CS202210140_480)
Cell Ontology Term: dentate gyrus granule cell (CL:2000089)
Rationale: mousebrain.org - added ZBTB20, DPF3, CEBPD based on human data
| Marker Genes |
|---|
| SLC17A7 |
| PROX1 |
| NR3C2 |
| TUBGCP2 |
| ZBTB20 |
| DPF3 |
| CEBPD |
Author annotation fields:
| Author annotation | Value |
|---|---|
| Cluster ID | 199 |
| Class auto_annotation | NEUR |
| Neurotransmitter auto_annotation | VGLUT1 |
| Neuropeptide auto_annotation | CART CBLN CCK CHGA CHGB GRP NAMPT NTS NUCB PDYN SCG UBL proSAAS |
| Subtype auto_annotation | DG-GRAN |
| Transferred MTG Label | None |
| Top three regions | Hippocampus: 96.8%, Thalamus: 3.2%, Cerebral cortex: 0.0% |
| Top three dissections | Human CA4C-DGC: 50.3%, Human DGR-CA4Rpy: 22.4%, Human CA1R-CA2R-CA3R: 16.8% |
| Top Enriched Genes | AJ006995.1, LINC01697, AC112721.2, CR382285.1, POSTN, CHRNA1, AQP9, LINC01338, TARID, LINC02237 |
| Number of cells | 1365.0 |
| DoubletFinder score | 0.04082388 |
| Total UMI | 17845.65861 |
| Fraction unspliced | 0.671094307 |
| Fraction mitochondrial | 0.005787946 |
| H19.30.002 | 736.0 |
| H19.30.001 | 559.0 |
| H18.30.002 | 70.0 |
| H18.30.001 | 0.0 |
| Fraction cells from top donor | 0.539194139 |
| Number of donors | 3.0 |
| subcluster_id | None |